Gene Hlac_0697 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0697 
Symbol 
ID7401832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp712812 
End bp713918 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content65% 
IMG OID643707763 
Productprotein of unknown function UPF0118 
Protein accessionYP_002565369 
Protein GI222479132 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.612025 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGAAA AGCGGTTCGT CATCGCCCTC TTCGGACTCG CTGTCGGGGC GCTCGTCGGG 
TTCATCGCCT ACCGGTTCGT CGCCCCGCTC ACCGTTGCCG TCTTCCTCTA CTACTCCACC
CGACGCCTCT TTCATCGGCT CGAACGCTTC CGGCTCCCCG CCCGAGTCAG GGCGATGTCC
GCGCTGTCGC TGATCGCCGT TCCGCTGATC GGCCTACTGA GCTACACCAT GCTGCTTCTG
GTGATCGAGG CCCGCCGGTT CATCGAGCAG TATCCGGTCG CCGAGACGGT CGGTGCCGAG
AACTCGTGGG TCGGCGATCT CGCCGAGCTG TCGAATCCGA CCTTCGACGG GATCATGCAG
GCGTATGAGT CCGGCCAGCT CGACCCGCTC ATCAACTTCG CGTCAGAGCA GGCGACCCTG
CTGGCGAGCA CCCTCTCGGG GCTCGTGTTG AGTCTCCTCA TCACGATCGT CGTCACCTAC
TACCTGCTGC TCGACGGCTC GAAGTTTCAC GAGTGGCTCC TCACGTTCGA CGACGACGCC
GTTGTGCGCG AGTACCTGGA GGCGGTCGAT GCCGAGCTAG AGGCGGTGCT GTACGGGAAC
CTGCTCAACG TCATCGCCAT CTCGATCATC GCCGTCGTGG CCTACACCGG ATACAACGTG
ATCGCCCCGG AACTCGTCGA GGTGCCGTAC CCGGCGCTCG CCGGTGCGCT CACGGGTGTC
GCCAGCCTGA TCCCCGTGAT CGGGATGAAG ATCGTGTACC TCCCACTCGC GGCGGTGACC
GCGGTCCCGG CGGCCCTCGG CGACGAGATC TCCGCACTCG TGTACGTGGC CGGGTTCCTC
GTCCTCGCCG CGATCGTCGT CGACACGATC CCCGACATCG TGCTCCGGCC CTACTTCAGC
GGGAAGACCA CTCACGTCGG GCTGCTCATG CTCGCGTACA TCTTCGGCCC GGTGGTGTTC
GGGTTCCACG GGCTGTTCCT CGCGCCGATC GTACTCGTGT TAGCGCTCAC GTTCGCCGAC
ACCGCCCTGA TACGGCTGCT CGGCGGCGAC CCCGAGGAAG TCGGTCCGGA GGTGCCGCGC
GGACAGCGCC AACTCGACGA GTTCTGA
 
Protein sequence
MDEKRFVIAL FGLAVGALVG FIAYRFVAPL TVAVFLYYST RRLFHRLERF RLPARVRAMS 
ALSLIAVPLI GLLSYTMLLL VIEARRFIEQ YPVAETVGAE NSWVGDLAEL SNPTFDGIMQ
AYESGQLDPL INFASEQATL LASTLSGLVL SLLITIVVTY YLLLDGSKFH EWLLTFDDDA
VVREYLEAVD AELEAVLYGN LLNVIAISII AVVAYTGYNV IAPELVEVPY PALAGALTGV
ASLIPVIGMK IVYLPLAAVT AVPAALGDEI SALVYVAGFL VLAAIVVDTI PDIVLRPYFS
GKTTHVGLLM LAYIFGPVVF GFHGLFLAPI VLVLALTFAD TALIRLLGGD PEEVGPEVPR
GQRQLDEF