Gene Hlac_0641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0641 
Symbol 
ID7401776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp661474 
End bp662346 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content72% 
IMG OID643707707 
Productbeta-lactamase domain protein 
Protein accessionYP_002565313 
Protein GI222479076 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.117018 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.604387 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACGC CGGACCTGAG GTCGTCGGTT ACCCGCGTCG CGGTCGACAC TCGTGCGCCC 
GGCGGGACGA CGAACGCCTA TCTCGCGGGC GGCGCCCTCG TCGATCCCGC GGCTCGCACA
GAGACGCTCG ACGCGGCGGT CGGCGTCGAC GGAGAGAGCG GTAACGGAAC AGAGGGCGGC
GCAGTCGACG CGATCGCCGT CACCCACGCC CACCCGGATC ACGTCGGCGC AGTCGCCGAG
TACGCCGACC TGACCGACGC GTCCGTGTTC GCGCACGCCG ACCACGTCGA CCGGTTCGCG
GCGGCGACCG GCGTCGAGCC AGACGAGACG TTTCGTGACG GCGATCGCGT CGGCAACACC
TCCGTCCGCG CGGTCGAGAC GCCGGGCCAC GCGCCGGATC ACGTCGCGTT CGCGGTCGAG
TCGAGGGGTG ACGGAGACGG CGACAGCGAC GCCGGTGCTG ACGGCACGCC CTCCGAACTC
CTCTGTGGCG ACCTCGCGAT CGAGTCGGGA AGCGTCGCGG TCGCCGCCCC CGACGGCGAC
CTCCACGAGT ACCTGAACAG CCTCGAACGC GTCCGCGAGG CGGGATACGG CCGGCTGTAC
CCCGGACACG GTCCCGTCAT CGAGGACCCG AATATCGTCT GTCAACGCCT GATCGACCAC
CGGCTGGACC GCGAGCGGGT AGTCCTTGCG GCGGTCGAGG CCGGCGCGAG CGACGTGGAC
GCGGTGGTCG ACGCCGCCTA CGAGAAGGAT CTGACCGGCG TTGCGGACCT CGCGCGGGCG
ACGGTCGTCG CTCACCTCGA AAAACTGGTC GCGGAGGGCC GGGTCGGCCG GGAGTGGACG
GATCGGGCCG ATATCGACGC GCCCGGAGAG TAG
 
Protein sequence
MATPDLRSSV TRVAVDTRAP GGTTNAYLAG GALVDPAART ETLDAAVGVD GESGNGTEGG 
AVDAIAVTHA HPDHVGAVAE YADLTDASVF AHADHVDRFA AATGVEPDET FRDGDRVGNT
SVRAVETPGH APDHVAFAVE SRGDGDGDSD AGADGTPSEL LCGDLAIESG SVAVAAPDGD
LHEYLNSLER VREAGYGRLY PGHGPVIEDP NIVCQRLIDH RLDRERVVLA AVEAGASDVD
AVVDAAYEKD LTGVADLARA TVVAHLEKLV AEGRVGREWT DRADIDAPGE