| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0478 |
|---|
| Symbol | |
|---|
| ID | 7400358 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | + |
|---|
| Start bp | 495956 |
|---|
| End bp | 497515 |
|---|
| Gene Length | 1560 bp |
|---|
| Protein Length | 519 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643707542 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002565150 |
|---|
| Protein GI | 222478913 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.156904 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCACCG CCCGTCGCAC CCTGATCTTC GCCCTGCTGC TCGTAGCCGC GGGCTCACTC
ATCTTCACCA CAGGCGCGGC GGTGGTCGAC GGCCCGGCCG ACACCTTCGC GGACGACGAC
CTCGCGGTCC AGCCGGCCGA CGGTCCGAAC GGGAACTACG CCTATTTAAA TGACGACGAC
GAGATCGTGG TCGACATCTC CGCGTCGAAC CCGAACCTCG GGCCCGACTT CGAGGGCGTC
AACCCCGACG CGCTCGCGGC GGCGGACGGC GTCTTCGAGA TCACCTACAC CGCCGACGAG
TATGCGCGCG TCTGGATCGA CCACCCCGGC GAGAACGTCA CGTTCACCGC CGACGGCAAG
TCGTTCGAGG GGCGGGACAA CAACGTCACG CTCGCGCCGA ACGAGTCGGT CGCGGTCGGG
CTCTCGCTCG ACGCGCGCGG CGAAGTCGCC GGGACACAGT TGGGCGCCGA CGAGTTCTCG
ATCCGCGGGG AGGTCGCGGA GCCCGAGTCG GTTCCATCTT CATCGGATTT CTCGACCGGA
GACGGCGGTC CGACAATAAC GGTCACGTCC CCGAGCGACG ACCGCCGCGA GTTCGTCGCG
AGCGACATCG ACCACGACGA CACGGTCCGG TTCGAGGCCG ACGGCATGCA CCTCGACGGC
GAGAACGTCA CCCTCGACCG GCTCGACTTA GCGGGCGTCC GAAACGAGCA CATCGAGGTG
AACGCGGCCG GGAGTCCGGA GCCCTTCGCG AACGGAAGCG CGCTGGACGC ACCGACGACC
CCGCGGCCGA TCGCGTACCT CGGCGTCGAG CACGACTTCG ACCCCGACGA GGTCGACGCG
ATGACGATCC GGTTCAGCGC CTCACGGGAG ACGCTCGACG ACGCCGGGAT CGACCCGAAG
AACGTGACGC TCTACCGGCA GACCGACGCC GGCAACTGGG CCGAAAAGGG TGCCAGCGTC
GCCGACGAGG ACGTGGTCCG TATTCGGGGG CTCTCCGAGG ACCGCGTGCA CTTCCGCGCG
ACGACCGACG GGTTCTCGAC GTTCGCGGTC GCGGAGCGCG TCCCCCGCTT CGACGTGACC
GAGACGGCTC TCGACACCCC GGCAATCGAG CCGGGAGAGG AGGCGACCGT CCGGGCGACC
GTGGAGAACG GCGGGGGCGC GGCGGGCGAG CGAACGGTGA CGCTGACGGC CGACGGCGAC
CCGGTCGCGA ACGAGACGGT CTCGCTGGCG CCGAACGAGA CGGCGACCGT CGCGCTCTCG
GGCGTGTTCG AGACCGCTGG CGAGTACGAT CTCGCGGTTG CCGGGACGGA CGCCGGAACC
CTGCTCGTTG GTGACCCGGC GGGCGACGAC GGGTCGGCGG ACAACGCGGG CACGAGGGCC
GGAACGGGAT CGGGAACCGA CGAAGGTGCG CAAACCGGTG ACGGAGCGGC AGAGGGGCCC
GTCGGTGGAC CGACCGAGGA GCCGGGCGCC ATCGACCTCG TCGAGCTGGG AGGGCTGCTC
GCTTTCGTCG TTCTCGTCGT CGCCGGAATC GCGCTCGTTC GCCGGATGCC TCGATCGTGA
|
|---|
| Protein sequence | MPTARRTLIF ALLLVAAGSL IFTTGAAVVD GPADTFADDD LAVQPADGPN GNYAYLNDDD
EIVVDISASN PNLGPDFEGV NPDALAAADG VFEITYTADE YARVWIDHPG ENVTFTADGK
SFEGRDNNVT LAPNESVAVG LSLDARGEVA GTQLGADEFS IRGEVAEPES VPSSSDFSTG
DGGPTITVTS PSDDRREFVA SDIDHDDTVR FEADGMHLDG ENVTLDRLDL AGVRNEHIEV
NAAGSPEPFA NGSALDAPTT PRPIAYLGVE HDFDPDEVDA MTIRFSASRE TLDDAGIDPK
NVTLYRQTDA GNWAEKGASV ADEDVVRIRG LSEDRVHFRA TTDGFSTFAV AERVPRFDVT
ETALDTPAIE PGEEATVRAT VENGGGAAGE RTVTLTADGD PVANETVSLA PNETATVALS
GVFETAGEYD LAVAGTDAGT LLVGDPAGDD GSADNAGTRA GTGSGTDEGA QTGDGAAEGP
VGGPTEEPGA IDLVELGGLL AFVVLVVAGI ALVRRMPRS
|
|---|
| |