| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0454 |
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| Symbol | |
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| ID | 7401072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 472018 |
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| End bp | 472953 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643707518 |
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| Product | signal peptide peptidase SppA, 36K type |
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| Protein accession | YP_002565126 |
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| Protein GI | 222478889 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.496953 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCGCA ACCCCCGCTC GAACGGGAAG AATCTTCTCG CGGCTGCGGT GATCGGCGCG
ACGGCGACAG TGGCGGGCAA GCGGCTCGTC GCTCGACTCA CCCGCGGGCG GTTCGGCGAG
ACAGAGGAGT ACAACACGGC GAAGGTGACG GTTTCTGGAC CGATCCGGCG CGACACCGGC
CGCCCGTCCC CGCTTTCGAG AGCGGGTGGG GCGACCGCCG ACGACGTGGT CGAGCAGATC
GAGGCGGCCG ACGAGGACGA GGACGTGGAG GCGCTCGTCG TCGAGCTCAA TACCCCGGGG
GGCGAGGTGC TCCCGAGCGA CGATATCCGG CGCGCGGCGG CCGACTTCGA CGGCCCCACG
CTCGCGTACG CTACCGACAC CTGCGCGTCC GGCGGCTACT GGATCGCGAG CGGCTGCGAC
GAGCTGTGGG CGCGCGACGC GAGCCTCGTC GGCTCGATCG GCGTCGTCGG CTCCCGCCCG
AACGCGGCCG GACTGGCCGA CAAGCTCGGG ATCTCCTACG AGCAGTTCAC CGCCGGCGAG
TACAAGGACG CCGGCGTCCC GCTGCGGGAG ATCGAGGAGG ACGAACGCGA GTACCTGCAG
GGGATCATCG ACGGCTACTA CGAGCAGTTC GTCGAGACGG TCAGCGAGGG CCGAGACATG
GACCCGGAGG CGATCCGGGA GACGGAAGCG CGGGTCTACC TCGGCAGCGA CGCCGCCGAG
ATCGGACTCG TCGACGAGCT CGGCACCGAA GACGACGTTG AAGACCGGCT CGAAGAGCTG
ATCGACACGG AACCAGAGAT CCACGAGTTC ACGCCCAAGC GGGGACTCGC GGAGCGACTC
GGTATCGGGG CCGAGCGCGT CGCGTTCGCG GCCGGCAGCG GCGTCGCGAG CGTGTTCACG
AACGAGGGCG GCGACGTGGA CGTCGAGCTA CGGTAA
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| Protein sequence | MERNPRSNGK NLLAAAVIGA TATVAGKRLV ARLTRGRFGE TEEYNTAKVT VSGPIRRDTG
RPSPLSRAGG ATADDVVEQI EAADEDEDVE ALVVELNTPG GEVLPSDDIR RAAADFDGPT
LAYATDTCAS GGYWIASGCD ELWARDASLV GSIGVVGSRP NAAGLADKLG ISYEQFTAGE
YKDAGVPLRE IEEDEREYLQ GIIDGYYEQF VETVSEGRDM DPEAIRETEA RVYLGSDAAE
IGLVDELGTE DDVEDRLEEL IDTEPEIHEF TPKRGLAERL GIGAERVAFA AGSGVASVFT
NEGGDVDVEL R
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