Gene Hlac_0208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0208 
Symbol 
ID7402137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp222129 
End bp223901 
Gene Length1773 bp 
Protein Length590 aa 
Translation table11 
GC content63% 
IMG OID643707271 
ProductL-lactate permease 
Protein accessionYP_002564883 
Protein GI222478646 
COG category[C] Energy production and conversion 
COG ID[COG1620] L-lactate permease 
TIGRFAM ID[TIGR00795] L-lactate transport 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.454514 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCATAC TGCTGGCGCT GTTGCCGCTC GCAGCGATCG CGATCATCAT GGTCCTCCTC 
TACCAGCCGG CGACGATCAC AATGCCCATC GCGTGGGCCA TCGCGGCCGT GGCCGCGTAC
GTCGGCTGGC AGATGTCTCC GACATTGATC GCGGCGGCTT CTATCCGTGG GGCGTTGACG
GCGACGCGAA TCCTCGTCAT CGTCTTCGGT GCAATACTGC TGCTGTACAC ACTCAAGCAG
TCGGGCGCGT TCGAAGTCAT CAACGCGGGC TTTTCCTCGA TCAGCGATGA CAGACGCGTG
CAGGTCATCC TCCTCGTGTT CCTCATGGGC TCGTTCATCG AGGGGGCAGC CGGGTTCGGG
ACGCCGGCCG CAATCGTCGG CCCGCTACTG GTCGGACTCG GCTTCCCGCC GCTGGCTGCG
GTGGTGGTCG CCCTAACCGG GAACATCCTC GCAATCACCT TCGGTGCAGT CGGGACACCG
CTTATTATCG GGTTCGAAGA CGTCGTCTTC GGGCAGGACC CGACAGAGAC CGGCACGGCA
GCGTACGCCG TCGTCCAGAA CGGCGGCTAT GAGAGTGTCG GCGCCTACGT GGCCCAGATC
GGAGTCTGGG CAGCCGTCAT TCACGCCATC GTGGGCATCG CGATTCCGTT CATCGGCGTG
GCGATGATGA CTCGCTTCTT CGGTGAGGAG CGCTCGCTCA AGCCCGCCAT CGAAGTGATT
CCGCTCACGC TGTTCGCGTG GGCCTCCTTC GTGATTCCGT ACCTCCTGAC GGCGTACTTC
CTCGGGCCGA CGTTCCCGGG ACTGCTGGGT GCGATGGTCG GTCTACTCGT CGTCGGCTCG
ACGCTGCGTG CGGGCTACTT CCTCCCGGAA GAGGAGTGGG ACTTCGGACC GCAGGAGCAG
TGGCCGGACC ACTGGATCGG CAAAATCGAG CCCGGAACGG GCATGGGCAC CTCCGACACC
GGCCAGAAGG TCGCGGCCGA CGGCGGCACG AGCCGCTTCG AGGAGATGCA CAGTCAAGAC
ATGTCCCTCG GTATGGCGTG GGCTCCCTAC ATCCTCGTTG CGGCCCTACT GATCGTGACT
CGAGTCATCG GACCCGTGCA GGGGTTCCTG TCGTCGACCG GCGTCATCAC GTGGAACAAC
ATCCTCGGAA CGCCGTTCTC TGAAGGTATC GAGATATTCT ACCTCCCGGG ATCGCTGTTC
GTGCTGGTCG CGGTCGTGAC GTACGGGCTC CACGGCATGG ACTCCGAGGG GATCAGAGAC
TCGTGGGCAG AAGCCATCAC GAACATCATT CCGGCGGTCA TCGCGCTGTG GTTCGCCGTG
GCGACGGTGA TGGTCATGCA AAAGACCGGT GCCGACATCG TGATCAACAA CGCCGCAGCC
GTCGATCTGG GCATGCTGCA GTTGCTGTCC CAATCCACGG CGAACCTCAC TGGCCAGCTG
TTCCCGTTCT TCTCGCCCTT CATCGGCGCG TTCGGCGCGT TCATCGCCGG TTCGAACACG
GTCAGCGACA TCCTGTTCGG CCTCTTTCAG TTCGAGGCGG CCCAGCAGAT CGGCGCCCCG
ACCCAAATTG TGGTCGCCGC ACAGGCGGTC GGTGGCGCAA TCGGTAACCT CATCGCTATC
CACAACGTCG TCGCCGCGCT CACTGTTGTC GGCCTCATCG GTGAGGAAGG GCGCGTCATC
CGGCTGGAGC TGATACCGGT GCTGTACTAC GGGGTTGCAA CCGGTCTCCT CACACTGATT
CTCGCCTACG TGGTGGTTCC GGGGACCTTC TGA
 
Protein sequence
MLILLALLPL AAIAIIMVLL YQPATITMPI AWAIAAVAAY VGWQMSPTLI AAASIRGALT 
ATRILVIVFG AILLLYTLKQ SGAFEVINAG FSSISDDRRV QVILLVFLMG SFIEGAAGFG
TPAAIVGPLL VGLGFPPLAA VVVALTGNIL AITFGAVGTP LIIGFEDVVF GQDPTETGTA
AYAVVQNGGY ESVGAYVAQI GVWAAVIHAI VGIAIPFIGV AMMTRFFGEE RSLKPAIEVI
PLTLFAWASF VIPYLLTAYF LGPTFPGLLG AMVGLLVVGS TLRAGYFLPE EEWDFGPQEQ
WPDHWIGKIE PGTGMGTSDT GQKVAADGGT SRFEEMHSQD MSLGMAWAPY ILVAALLIVT
RVIGPVQGFL SSTGVITWNN ILGTPFSEGI EIFYLPGSLF VLVAVVTYGL HGMDSEGIRD
SWAEAITNII PAVIALWFAV ATVMVMQKTG ADIVINNAAA VDLGMLQLLS QSTANLTGQL
FPFFSPFIGA FGAFIAGSNT VSDILFGLFQ FEAAQQIGAP TQIVVAAQAV GGAIGNLIAI
HNVVAALTVV GLIGEEGRVI RLELIPVLYY GVATGLLTLI LAYVVVPGTF