Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_0111 |
Symbol | |
ID | 7401631 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 116382 |
End bp | 117887 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643707174 |
Product | replication factor A |
Protein accession | YP_002564787 |
Protein GI | 222478550 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1599] Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.462396 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAGTGA TAGAGGACGT CTACGAGGAT CTCGACACCG ATGTCGAGTT CGAGGAATTC GAGGCAGCCG TCGAGGACAA AGTGGAGCAG ATGGGCGGAC TCGCCGACGA GGAGACCGCG GCCATGCTCA TCGCCCACGA GCTGCGCGAC GAGGAGGCCG ACACGATCGC CGACATCGAG CCCGGCATGA ACGACGTGAA GTTCCTCGGG AAGGTGACCT CCATCGGCGA CATCCGCACG TTCGAGCGCG ACGACGAGGA CGCCGAGGAG GGCCGCGTCT GCAACGTCGA CGTGGCGGAC GCCTCCGGCT CCGTGCGCGT CGCACTGTGG GACGATATGG CAGCCGCGGC CGAAGAGCAG TTGGAGGTCG GACAGGTGCT CCGCGTCATG GGCCGCCCGA AAGAGGGGTA CAGCGGACTC GAAGTGAGCG CGGACAAGGT CGAGCCGGAC GAGGACGCCG AGGTCGACGT GCAGGTGCTC GACACCTATC GGGTGGAGGA CCTCTCGCTC GGTGCCTCCG ACGTGGACCT CGTCGGGCAG GTGCTCGACA CGGACTCGAT CCGCACGTTC GACCGCGACG ACGGCTCTGA GGGGCGGGTC GCCAACCTCA CCGTCGGCGA CGAGACGGGT CGCGTGCGCG TAACACTTTG GGACGACAAG GCCGACCTCG TCGAGGAGTT CGAGGCCGGC GAGGTCGTCG AGGTCGGCGA CGGCTACGTC CGCGAGCGCG ACGGCGACTT GGAGCTCCAC GTCGGCGACC GCGGCACCGT CGAGCGCGTC GACGAGGACG TGGAGTACGT CCCGGAGACC ACGGACATCG CCGAACTGGA GATCGGCGAG ACCGTCGACA TCGGCGGGGG CGTCATCGAG ACGGATCCGA AGCGCACGTT CGACCGCGAC GACGGCTCGG AAGGGCAGGT CCGGAACGTC CGCATCAAGG ACGACACCGG CGAGATCCGC GTCGCGCTGT GGGGCGACAA GGCCGACCGT GAGATCGAGC TGGCCGACCG CGTCGTCTTC ACCGACGTGG AGGTTCAGGA CGGCTGGCAG GACGACCTCG AGGCCTCCGC GAACTGGCGT TCGACGGTCA CCGTCCTCGA CGAAGGGAGC GATGCGGTGG GCGGCGCCTC AGGGTCCGGT AGCGCCGGGA GCAGCGACGA CGGCGACGCG CACGGGACAA ACAATACCGG GCTCGGCGCC TTCGCTGGAG ACGAACAGAA GGCGGCCGCC GAGGCCGTCG CCGGCGAGAC CGGCGGAGAC GGTGGGAACA GCGGGGTCGG CGGCGGGAAC GGTGGATCCG GCGGCGCCGC GACCGCGACA GCGGAGCAGT CGGCCGAAGA GATCGAGTTC ACCGGGACAG TCGTCCAGAC CGGCGATCCT GTCGTGTTGG ACGACGGCCA GCGGACGAAG AGCGTCGAGA CCGACGCGAG CCTCCGGCTC GGCGAGGAGG TCACGGTGCG CGGGACAGAA CGAGACGGAA CGATCGACGC CGACGACGTG TTCTAA
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Protein sequence | MGVIEDVYED LDTDVEFEEF EAAVEDKVEQ MGGLADEETA AMLIAHELRD EEADTIADIE PGMNDVKFLG KVTSIGDIRT FERDDEDAEE GRVCNVDVAD ASGSVRVALW DDMAAAAEEQ LEVGQVLRVM GRPKEGYSGL EVSADKVEPD EDAEVDVQVL DTYRVEDLSL GASDVDLVGQ VLDTDSIRTF DRDDGSEGRV ANLTVGDETG RVRVTLWDDK ADLVEEFEAG EVVEVGDGYV RERDGDLELH VGDRGTVERV DEDVEYVPET TDIAELEIGE TVDIGGGVIE TDPKRTFDRD DGSEGQVRNV RIKDDTGEIR VALWGDKADR EIELADRVVF TDVEVQDGWQ DDLEASANWR STVTVLDEGS DAVGGASGSG SAGSSDDGDA HGTNNTGLGA FAGDEQKAAA EAVAGETGGD GGNSGVGGGN GGSGGAATAT AEQSAEEIEF TGTVVQTGDP VVLDDGQRTK SVETDASLRL GEEVTVRGTE RDGTIDADDV F
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