| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_2377 |
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| Symbol | |
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| ID | 4709224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 2610448 |
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| End bp | 2611917 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639856852 |
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| Product | general secretory pathway protein E |
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| Protein accession | YP_001003942 |
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| Protein GI | 121999155 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGAGA TCCCCTTCGC CTTCGCCCGC CGCCACGGCC TGGTACCGCT GGAGATCGGC
GACGGCCAGG TCCGCGTCGC CTACCGCACC GGGGTGCAGC CGAGCGCTAT CGCCGAACTG
CGCCGGCGCC TGGGCCAGCC CCTGGCCCTG GAGCGGGTCG ATACCGAGCG CTTCGAGGCA
CTGCTGCGCG AAGTCTACGA ACGCTCCTCC GGCGAGGCGG CACAGGCCAT GGAGGGGATC
GGCGACGACA TGGACCTGCA GAGCGTGGCC AGCGAACTGG CCGAGCCGCA GGACCTCATG
GAGACCGAGG ACGACGCCCC GGTCATCCGC CTGATCAACG CCCTGCTCAC CGAGGCGATC
AAGGAGGACG CCTCGGACAT CCACATCGAG ACCTTCGAGT CCCGCCTGGT GGTCCGCTTT
CGGGTCGACG GCGTGCTGCG CGAGGTCCTC GAGCCGCCGC CGGCCCTGGC GCCGCTGCTG
ATCTCCCGGG TGAAGGTGAT GGCGCGACTG GACATCGCCG AGAAGCGCCT CCCCCAGGAC
GGGCGCATCT CCCTGCGCAT CGCCGGGCGC CCGGTGGACG TGCGCGTCTC CACCCTGCCC
GTCGGTCAGG GCGAGCGAGT GGTGCTGCGC CTGCTCGACA AGCAGGCCGG GCGGCTCAAT
CTCACTCATC TGGGCATGGA CGAGCGCAAC CTGGCCAGCC TCCAGCGGGT CATCCACGCG
CCCCACGGCA TCCTGCTGGT CACCGGGCCC ACCGGCTCGG GCAAGACCAC GACCCTCTAC
GCCGCTCTGG CCGCCATCAA CGACCGCCAG CGCAACATCA TGACCGTGGA GGACCCCATC
GAGTACTACA TCGACGGGGT CAACCAGACG CAGATCAACC CGAAGGTGGA CATGACCTTC
GCCCGCGGCC TGCGCGCCAT CCTGCGCCAG GACCCGGACG TGGTGATGGT CGGCGAGATC
CGCGACGTGG AGACCATGGA GATCGCCATC CAGGCCTCGC TGACCGGCCA CCTGGTGCTC
TCCACTCTGC ACACCAACAC CTCCATCGGC GCCGTCACCC GGCTGCGGGA TATGGGCATC
GAGCCCTTCC TGCTCGCCTC CAGCCTCATC GGCGTCATGG CCCAGCGCCT GGTGCGCCTG
CTCTGCCCCG AGTGCAAAAC CCCGTACCAG CCGACGCCCT CCGATCTGGA GCGGCTCGGC
ATCGACGCCC GGGGGGAACT GCCGACGCTC TACCAGGCCG TGGGCTGCGA GGCGTGCAAC
CACCTGGGCT ACCGCGGCCG GACCGGGATC TACGACGTGG TGGAGCTCGA CCCCACGCTC
CGGCAGATGA TCCACGACGG CGCCGGTGAG CAGGATATGG AGCGCTACGC CCGGCGCAGC
AACCCCTCCA TGGCCGCCGA TGGCGCACGG CGCATCCTCA ACGGCGAGAC CACGGTGGAA
GAGGTCTTGC GGGTGACGCA GGAGGGGTAA
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| Protein sequence | MDEIPFAFAR RHGLVPLEIG DGQVRVAYRT GVQPSAIAEL RRRLGQPLAL ERVDTERFEA
LLREVYERSS GEAAQAMEGI GDDMDLQSVA SELAEPQDLM ETEDDAPVIR LINALLTEAI
KEDASDIHIE TFESRLVVRF RVDGVLREVL EPPPALAPLL ISRVKVMARL DIAEKRLPQD
GRISLRIAGR PVDVRVSTLP VGQGERVVLR LLDKQAGRLN LTHLGMDERN LASLQRVIHA
PHGILLVTGP TGSGKTTTLY AALAAINDRQ RNIMTVEDPI EYYIDGVNQT QINPKVDMTF
ARGLRAILRQ DPDVVMVGEI RDVETMEIAI QASLTGHLVL STLHTNTSIG AVTRLRDMGI
EPFLLASSLI GVMAQRLVRL LCPECKTPYQ PTPSDLERLG IDARGELPTL YQAVGCEACN
HLGYRGRTGI YDVVELDPTL RQMIHDGAGE QDMERYARRS NPSMAADGAR RILNGETTVE
EVLRVTQEG
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