Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_2373 |
Symbol | |
ID | 4710064 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | + |
Start bp | 2607745 |
End bp | 2608308 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639856848 |
Product | general secretion pathway protein H |
Protein accession | YP_001003938 |
Protein GI | 121999151 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4970] Tfp pilus assembly protein FimT |
TIGRFAM ID | [TIGR01708] general secretion pathway protein H [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.495108 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGAGAT CGGCAACTGG GACGTGGACT GACCGACGCC GCGCCGGCTT CACGCTCGTC GAGCTCCTGG CGGTCATCGC CATCATGGCG GCGCTCACCG GGCTGGTGGT GATCTCGGTG GGCGACGGCG GGCGGGACCG GGAGGTCCAC CAGCACGCGC AGCGCCTCGC CGCCCTGATC GAGCTGGCCC GCGAGGAGGT CCTGCTCGGC GCGGGCGAGG TGGGCGTGGC CTTCACCCGG CACCGCTACC ACTTCCAGCG CCAGCAGCTG GTGGATGACG ACACGGTGGA GTGGCGCGAC ATCCCCGATG CCGATACCCT CCGGCCCCGC TCGCTACTCG ACGACGACCT GGAGCTGGCC CTGCGGGTCG CAGGGCGCGG GGCGCCGCTG GAGCTGGATC CGGAGCACCC GGACCCTCAA GTCTTCATCG AGGGCAGTGG GGAGATCACC CCCTTTGAAC TCTTCCTGAT CGACTCGGAC GATCGCGAGC GCGCCGTCCG CCTGACCGGC GAGATGGACG GCTCGCTGGC CATCGACCGG CCCGGCCCAC GGGAGCTGCC ATGA
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Protein sequence | MPRSATGTWT DRRRAGFTLV ELLAVIAIMA ALTGLVVISV GDGGRDREVH QHAQRLAALI ELAREEVLLG AGEVGVAFTR HRYHFQRQQL VDDDTVEWRD IPDADTLRPR SLLDDDLELA LRVAGRGAPL ELDPEHPDPQ VFIEGSGEIT PFELFLIDSD DRERAVRLTG EMDGSLAIDR PGPRELP
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