| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_2050 |
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| Symbol | |
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| ID | 4710014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 2253282 |
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| End bp | 2254412 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639856523 |
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| Product | porin |
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| Protein accession | YP_001003616 |
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| Protein GI | 121998829 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.946286 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAAC AACTGATCAC CCTGGCGACG GCCACCGCCA TGACCGCGCC CGCCGCCGTG
CTGGCCGACA GCCACGACAG CCACAGCCCG GAGATCTACG GCCAGGTGCA CATGTCGATG
AACCACATCG ACAACGACGA CACCGAGGGT GAGGACAGCG CCCTGAACAT CTCCTCCAAC
TCCTCCCGCT TCGGCATCCG CGGCTCCGAG GAGATCCAGC CGGGGCTCAC CGGCATCTAC
CAGCTGGAGC TCGGCGTCCA CTGGGGCGGC CAAGGGTCAG ACAAGACCTC TACGACCGGG
GATGACTCCA TCTGGCGCCA GGTCCGCGAC AGCTACGTCG GCCTTGAGGG CGACTTCGGT
ACCCTCCGTG CCGGCCGCCT CCCGGCTGCC AACCAGTACA TCTACGACGC CAACTTCTTC
ATCAACACCA TCGGCGATCC CGGCGGGCTG ACCGGCTTCG ACATTGCTGG GAATGCGGGC
ATCGGGGGCC GCTACTCCAG TGCGGTGCAG TACACCGCCC CGATGGTCGG CCCGCTCGGC
GCCAGCGTCA CCGTCGCCCC GTCGAACAAC GGCGCTGACG AGCACTCGAT GATCCTGCGC
GGCACCTACG AGGAGGGGCC GTTCTTTGGT GCCGTCAACT ACATCAGCAA GCCGGATGCG
ACGGTCGAAG ATCCAGAGGA CGATGATATT ACGTCGCAGC ACGACCTCCA GTTCCTGGTG
CTGAGCGGCG GCTACGAGCA GAACGGGCTG CGGGTGGCCG GCCTCTACGG CCTGGTGCTC
GACGACGACG ACCTGACGGA CGGCGCGCCG GAAATCGACG GTGAGGACAG CTTCTTCTCC
CTCGGCGCCT CCTTCGACAT CACCGCCCAG GGCACGGTCA AGGGTCAGTA CACGGCGTAC
ATGGCCGATG AGGGCAGTGA GGGCGATTCC AACCTGTTCG CCATCGGCTA CGACCACGCC
CTGTCGGACC GGACCACCGC CTACGCCGTC TATGCGCACA TGGACAACGA TGAGATGGCG
AGCCGCGGGG TAGACGGTTA CGGCCACGGC GGCGGTCCGG ACGATCTGGC TGGCCCGAAT
AACGACGCCG ATCCCAACGC CTTCTCGGTG GGCGTGACCC ACAACTTCTA A
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| Protein sequence | MKKQLITLAT ATAMTAPAAV LADSHDSHSP EIYGQVHMSM NHIDNDDTEG EDSALNISSN
SSRFGIRGSE EIQPGLTGIY QLELGVHWGG QGSDKTSTTG DDSIWRQVRD SYVGLEGDFG
TLRAGRLPAA NQYIYDANFF INTIGDPGGL TGFDIAGNAG IGGRYSSAVQ YTAPMVGPLG
ASVTVAPSNN GADEHSMILR GTYEEGPFFG AVNYISKPDA TVEDPEDDDI TSQHDLQFLV
LSGGYEQNGL RVAGLYGLVL DDDDLTDGAP EIDGEDSFFS LGASFDITAQ GTVKGQYTAY
MADEGSEGDS NLFAIGYDHA LSDRTTAYAV YAHMDNDEMA SRGVDGYGHG GGPDDLAGPN
NDADPNAFSV GVTHNF
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