| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1990 |
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| Symbol | |
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| ID | 4710321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 2195295 |
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| End bp | 2196791 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639856463 |
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| Product | TolC family type I secretion outer membrane protein |
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| Protein accession | YP_001003556 |
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| Protein GI | 121998769 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCGAG GCAACGAGAG ACTGCAGTTC AGGCTCGCCC CCCGGGTCAC CGGCTGGACC
CTGGCCGCCC TGCTGGCGCT GCCCGGGGCC ACCGGTGCCG GGGACGAGGA CAACGACGAT
CGCGACGACG CCGAGGCGGT GGTCGACGCC CCGGTGCCAG TGGAGGACGA AGAGGACGCC
CTGGCCCCGG CAGAGATTGA GGAGCGGACT CCGCAGCAGG ACCTGCTGGA CATCTACCGC
CTGGCGGTGG AGGCCGACCG CAGCCTGTCC GCCGCGCTCA ACCGGCGCCG CGCCGCCGAC
GAGCAGATCG CCCAGGCCCG CTCGCAGTTC CTGCCGCAGA TCAATGCAAC AGCAAAGTAC
GAAGACATCG ATTCAGAGAC CGACTGGGAT GGGGGTGCCA CCGTGGACGG CGACACCTCG
GGGTGGCAGG CGACCCTCTC TTTAACCCAG CCGATCTTCC GGCGCGGCAA CTTCATCGAC
CTGGAGCGGG CGCGGACCGC CGTGGACCGG GCCGGGATCG AACTCGCCGT GGCCGAGCAG
GGGCTGGTGG TGGACGTCAC CGAGGCGTAC TTCGACGTGC TCCTGGCCCA GGACGAGCAG
GCCCTGGTCG AGGCCGAGCT AGCTGCCGTT GAGAGTCAGC TTCGCCGCGC CGAGCGGGCC
CTGGAGGTGG GCACCGGCAC CCAGACCGAC GTCGACGAGG CCCGGGCCAC CTTCGACCGG
GTGCGCGCCG AGCGGGTGGC GGTGGACAAC CAGGTGGAGG TCGCCAAGCA GGCCCTGCGC
CGACTCACCG GCGAACTGCC CGGGGAGCTG GCCGGCCTCG GCGAGGCGTT CGAGCCGCAG
CCGGTGGAAC CTGCCGACAC CGACCACTGG GTAGACCTGG CCCAGCGCTA CAACCTGGAG
GTTCAGCTCG CCGAGCGGGA CGACCAGCTG GCCCGCCACG ACGTCGAGGG GCAGCGCGCC
GATCGCTGGC CGGAGGTTGA CCTGGAAGCC TCTTTACGAC GAGAAGATGG CGAAAGCCTT
AACCAGCAAG CAATGACGAG CATGGACCGT CAGATAGACA CCCGCTCCAT CCGCCTGCAG
GTCTCCGTGC CGCTTTACAC CGGCGGCGCC ATCTCCAGCC GGGTCCGTGA GGCCGAGGCC
GAACGCACCG CAGCCAGCGA CGACCTGGCC GACCAGCGCC GGGCCAGTGC CCTGGACGCC
CGCTCCGCCT TCCTCGGCCT GACCTCGGAG CTGGAACGGG TCCGGGCCCT GGAGCAGGCC
CTGGTCTCGG CGCGCAGCAA CGAGGCGTCG GTGCGTCGCG GGCAAGAGGT GGGCACCCGC
ACCACCACCG ACGTCCTCGA CGCCCAGAGC CAGCGCTTCG AGACCAAGCG CGACCTGGCT
GCAGCGCGTT ATGATTACCT GCTGAACTTT GTGCAGTTGC AGGCGTCCGC CGGACTGGCG
GTGGATGAGA CGGTCATCCG CGAGATCAAC GAGCAGCTGC AGTCGGTCTC TCGATAA
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| Protein sequence | MKRGNERLQF RLAPRVTGWT LAALLALPGA TGAGDEDNDD RDDAEAVVDA PVPVEDEEDA
LAPAEIEERT PQQDLLDIYR LAVEADRSLS AALNRRRAAD EQIAQARSQF LPQINATAKY
EDIDSETDWD GGATVDGDTS GWQATLSLTQ PIFRRGNFID LERARTAVDR AGIELAVAEQ
GLVVDVTEAY FDVLLAQDEQ ALVEAELAAV ESQLRRAERA LEVGTGTQTD VDEARATFDR
VRAERVAVDN QVEVAKQALR RLTGELPGEL AGLGEAFEPQ PVEPADTDHW VDLAQRYNLE
VQLAERDDQL ARHDVEGQRA DRWPEVDLEA SLRREDGESL NQQAMTSMDR QIDTRSIRLQ
VSVPLYTGGA ISSRVREAEA ERTAASDDLA DQRRASALDA RSAFLGLTSE LERVRALEQA
LVSARSNEAS VRRGQEVGTR TTTDVLDAQS QRFETKRDLA AARYDYLLNF VQLQASAGLA
VDETVIREIN EQLQSVSR
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