Gene Hhal_1923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1923 
Symbol 
ID4711262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2118360 
End bp2119214 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content69% 
IMG OID639856396 
Productperiplasmic binding protein 
Protein accessionYP_001003489 
Protein GI121998702 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTGCTGG CGGCGTGGTC GCCGGTGCAT GCTGGTGAAC GCTGCGTGGA GGACGACGCC 
GGCCGCGAGG TCTGCCTGGA GGCCCCGGCG GAGCGGATTG TGGCCCTCTC GCCCGGGGCG
ACGGAACTGC TCTTCGCCGC CGGCGCCGGG GACCATGTGG TGGCCGCGGT CAGTCACGCG
GATTATCCGG AGGCGGCGGA GGAACTGCCC CGGGTCGGCA CCTACGACCG GCTCGATATG
GAGTCGATCC TCGCGAAGGA TCCGGATCTG GTGGTGGGCT GGACCAGCGG CAACTCCAGC
AGCCAGCTGG AGCGGATCGA GGCGCTGGGC CTGCCGCTCT ACCGCAGCGA TCCGAAGGTC
CTCGACGAGA TCGCCACCTC CCTGGAGCGT CTGGGTACCC TGGCCGGCAC TGAAGACGAG
GCCGACGCCG AGGCCGCCCG CTTCCGCGAT GCGCGGGACG AGCTGGAGGC CGAGTACGCC
GACCGCGATC CGGTGCGGGT CTTCTACCAG ATCTGGCCGG ACCCGGTGAT GACCGTCAAC
GACGAGCAGA TCATCAGCGA GTCGATCCGC ATCTGCGGCG GCGAGAACGT CTTCGGTGAT
CTCGACAGCC TGACCCCGCG GCTGGACACC GAGTCCATCC TTGCGGCCGA CCCGGAGGCG
ATCGTCGCCG GCGGCATGGG CGAGGCGGAT GACTCGTGGC TGGAGGAGTG GCGGCGCTAT
GACATCCTCG AGGCCACCGC CAAGGACAAC CTCTTTTTTG TCGAGCCGTC CACGATCCAG
CGCCCGACGC CACGCATCCT GGAGGGGACG CGGGTGCTGT GTGACAAGCT CCAGCAGGCC
CGGCGCAATC GCTGA
 
Protein sequence
MLLAAWSPVH AGERCVEDDA GREVCLEAPA ERIVALSPGA TELLFAAGAG DHVVAAVSHA 
DYPEAAEELP RVGTYDRLDM ESILAKDPDL VVGWTSGNSS SQLERIEALG LPLYRSDPKV
LDEIATSLER LGTLAGTEDE ADAEAARFRD ARDELEAEYA DRDPVRVFYQ IWPDPVMTVN
DEQIISESIR ICGGENVFGD LDSLTPRLDT ESILAADPEA IVAGGMGEAD DSWLEEWRRY
DILEATAKDN LFFVEPSTIQ RPTPRILEGT RVLCDKLQQA RRNR