Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1923 |
Symbol | |
ID | 4711262 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 2118360 |
End bp | 2119214 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639856396 |
Product | periplasmic binding protein |
Protein accession | YP_001003489 |
Protein GI | 121998702 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTGCTGG CGGCGTGGTC GCCGGTGCAT GCTGGTGAAC GCTGCGTGGA GGACGACGCC GGCCGCGAGG TCTGCCTGGA GGCCCCGGCG GAGCGGATTG TGGCCCTCTC GCCCGGGGCG ACGGAACTGC TCTTCGCCGC CGGCGCCGGG GACCATGTGG TGGCCGCGGT CAGTCACGCG GATTATCCGG AGGCGGCGGA GGAACTGCCC CGGGTCGGCA CCTACGACCG GCTCGATATG GAGTCGATCC TCGCGAAGGA TCCGGATCTG GTGGTGGGCT GGACCAGCGG CAACTCCAGC AGCCAGCTGG AGCGGATCGA GGCGCTGGGC CTGCCGCTCT ACCGCAGCGA TCCGAAGGTC CTCGACGAGA TCGCCACCTC CCTGGAGCGT CTGGGTACCC TGGCCGGCAC TGAAGACGAG GCCGACGCCG AGGCCGCCCG CTTCCGCGAT GCGCGGGACG AGCTGGAGGC CGAGTACGCC GACCGCGATC CGGTGCGGGT CTTCTACCAG ATCTGGCCGG ACCCGGTGAT GACCGTCAAC GACGAGCAGA TCATCAGCGA GTCGATCCGC ATCTGCGGCG GCGAGAACGT CTTCGGTGAT CTCGACAGCC TGACCCCGCG GCTGGACACC GAGTCCATCC TTGCGGCCGA CCCGGAGGCG ATCGTCGCCG GCGGCATGGG CGAGGCGGAT GACTCGTGGC TGGAGGAGTG GCGGCGCTAT GACATCCTCG AGGCCACCGC CAAGGACAAC CTCTTTTTTG TCGAGCCGTC CACGATCCAG CGCCCGACGC CACGCATCCT GGAGGGGACG CGGGTGCTGT GTGACAAGCT CCAGCAGGCC CGGCGCAATC GCTGA
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Protein sequence | MLLAAWSPVH AGERCVEDDA GREVCLEAPA ERIVALSPGA TELLFAAGAG DHVVAAVSHA DYPEAAEELP RVGTYDRLDM ESILAKDPDL VVGWTSGNSS SQLERIEALG LPLYRSDPKV LDEIATSLER LGTLAGTEDE ADAEAARFRD ARDELEAEYA DRDPVRVFYQ IWPDPVMTVN DEQIISESIR ICGGENVFGD LDSLTPRLDT ESILAADPEA IVAGGMGEAD DSWLEEWRRY DILEATAKDN LFFVEPSTIQ RPTPRILEGT RVLCDKLQQA RRNR
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