Gene Hhal_1919 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1919 
Symbol 
ID4710633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand- 
Start bp2115235 
End bp2115951 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content72% 
IMG OID639856392 
Producthypothetical protein 
Protein accessionYP_001003485 
Protein GI121998698 
COG category[S] Function unknown 
COG ID[COG0398] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACGGAA CGACCCTGCG TTGGACCACC CTCGGCGCCC GCGCCGCTCT GGCGATGCTG 
TTGGTGGCGC TGCTCGGGGC CCTGTGGGCC GGGAGTGCCC CCGAGTGGGC CTGGGTGCAC 
GGCCAGCTGC AGCAGCTCCG GCAGCTGGCC GAGTCGCAGC CGGTGCAGGC GGCGCTCGCC 
TTCCTGGCCC TGCGTTTTTT CTTCTCGGTG GTCTCGGTGC CCGGCAGCGG GGTGCTGACC 
GTTGCCGGCG GGGTCATGTT CGGGTTCTGG GCGGGGCTGG CGCTGGTCCT GGTGGCGGTG 
AGCACCGGCG CGCTGGCGAT CTTCCTGCTC ACCCGCTACG CCCTCCACGA TGCGGTGCGC 
CGCCGGTTCC CGGACGCCCT GCAGCGTGTG GACCGGCACT GTGCCGATCA CGGGCCGAGT 
GCGCTGTTCC TGCTGCGCAT CGCCGAGCCG TTCCCCACTT TCCTGATCAA CGCGCTCTTT 
GCGCTGACCC GGATGCCGGC GCGGACCTAC TTCTGGGTGA GCCTGCTGGG CATGCTCCCT 
GGCGTGACCA TCCTCACCAA CGCCGGGGCG CATCTGGAGG CGGTCCACAC CCCGGCGGAG 
CTGATGAGCA CTGGGATGAT CGCCTCGCTG GTGGCGTTGG GCGCGCTGCC CCTGCTCTCC 
AGCCTCGCCG CGGCGCGGCT GCGTCGGCGA GGCGCCAGCG GCGGGCCGGA GGGTTAA
 
Protein sequence
MNGTTLRWTT LGARAALAML LVALLGALWA GSAPEWAWVH GQLQQLRQLA ESQPVQAALA 
FLALRFFFSV VSVPGSGVLT VAGGVMFGFW AGLALVLVAV STGALAIFLL TRYALHDAVR 
RRFPDALQRV DRHCADHGPS ALFLLRIAEP FPTFLINALF ALTRMPARTY FWVSLLGMLP 
GVTILTNAGA HLEAVHTPAE LMSTGMIASL VALGALPLLS SLAAARLRRR GASGGPEG