Gene Hhal_1907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1907 
Symbol 
ID4710653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2102513 
End bp2103964 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content73% 
IMG OID639856380 
Productcobyric acid synthase CobQ 
Protein accessionYP_001003473 
Protein GI121998686 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1492] Cobyric acid synthase 
TIGRFAM ID[TIGR00313] cobyric acid synthase CobQ 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTGAGAG CCCGCACCCT GATGCTCCAG GGCACCTGCT CCGGCGCCGG CAAGACGGCG 
CTGGTGGCGG GGCTGTGCCG GCTGCTCGCC CGCCACGGCG TCCGCGTGGC GCCGTTCAAG
CCGCAGAACA TGAGCAACAA TGCGGCGGTC ACCGCCGACG GTGGCGAGAT CGGGCGCGGT
CAGTGGCTTC AGGCCCTGGC TGCTGGGCTG CCGGCGCACA CCGACATGAA CCCGGTGCTA
CTCAAGCCCG AGGCCGAGCG CACCGCCCAG GTGGTGGTCC AGGGCCACGT CACCGGGCGG
CTGGAGGCGC GCGCCTTCCG CGAGGCCCGC CAGCCGCTGC TGCCGCCGGT GCTCGAGTCC
TTCCAGCGCC TGTGCGCCGC CTACGACGTG GTGCTGGTGG AGGGGGCGGG TTCGCCGGCG
GAGCCCAACC TGCGCCAGGG GGATATCGCC AACATGGGCT TTGCCGAGGC GGCCGATGTG
CCGGTCTGGC TGGTCGGCGA CATCGATCGC GGCGGGGTCT TCGCCTCCCT GCTCGGCACC
CTGGAGTGGC TCGACGACGC CGACCGGCGC CGGGTGGAGG CGCTGATCAT CAACCGTTTC
CGCGGTAGCC CCGAACTCCT CGGCGAGGCG CCAGCCCAGC TGGAGGCCCG GGGCGGGGTG
CCGGTGATCG GCGTCGTCCC CGCCGTGCCC GATCTGCACT TGCCCGAGGA GGATGCCCCG
TACCGGATGG CCGGGCCGCG CGGCTCCGGC GGCGCCCTGC AAGTGGTGGC GGTGGCCTAT
CCGCGGATGA GCAACCACGA CGATCTCGAC GCCCTGGACG CCGAGTCCGG GGTGCACGTT
CGCTTCGCCC GCCAGCCCCG GGAGCTCGAC GGCGCCGATC TCATCGTCCT GCCCGGGTCC
AAGCACGTCT TCTCGGATCT GGCCTGGCTG CGCGAGTCGG GCATGGCCGA GGCGCTCTAT
CGCCACTGCC GCTATGGGGG TCGGGTGGTC GGCCTCTGCG GCGGGCTGCA GATGCTCGGC
GAGGGCATCG AAGACCCGGA AGGCGTCGAG GGCGGCGGCA GCGCACCGGG GCTGGGTCTG
CTGCCGGTGC ACACCCGTCT GGCGCCGACC AAGCAGCTCG CCGAGGTGCA CGGCCACGCC
GAGTGGCCGG CGCCCGTGGC GGTCACCGGC TACGAGATCC ACCACGGCGT AACCGGCGCC
CAAGAGGGGC TCTTCCCCTT CGTGGCGCGC TCCGATGACG GTCGCGTGCT CGGCAGCTAC
CTCCACCGGC TGTTCGACAG CGGACCGTTC CGCCGTGCCC TGCTGGTGGA GTGGTTCGCC
CTGGAGGGCG AGGGCGGCGA CGAGCAGGCG CGCATCGAGG CGGAGCTGGA CCGGCTCGCC
GACACCCTGG AGCAGGCCCT CGAGCCGGGC TGGTTAAAGG CGCTGGGCGT ACCTGCGCGG
CCGTCGACCT AG
 
Protein sequence
MVRARTLMLQ GTCSGAGKTA LVAGLCRLLA RHGVRVAPFK PQNMSNNAAV TADGGEIGRG 
QWLQALAAGL PAHTDMNPVL LKPEAERTAQ VVVQGHVTGR LEARAFREAR QPLLPPVLES
FQRLCAAYDV VLVEGAGSPA EPNLRQGDIA NMGFAEAADV PVWLVGDIDR GGVFASLLGT
LEWLDDADRR RVEALIINRF RGSPELLGEA PAQLEARGGV PVIGVVPAVP DLHLPEEDAP
YRMAGPRGSG GALQVVAVAY PRMSNHDDLD ALDAESGVHV RFARQPRELD GADLIVLPGS
KHVFSDLAWL RESGMAEALY RHCRYGGRVV GLCGGLQMLG EGIEDPEGVE GGGSAPGLGL
LPVHTRLAPT KQLAEVHGHA EWPAPVAVTG YEIHHGVTGA QEGLFPFVAR SDDGRVLGSY
LHRLFDSGPF RRALLVEWFA LEGEGGDEQA RIEAELDRLA DTLEQALEPG WLKALGVPAR
PST