| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1902 |
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| Symbol | |
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| ID | 4710676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 2093831 |
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| End bp | 2095954 |
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| Gene Length | 2124 bp |
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| Protein Length | 707 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639856375 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_001003468 |
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| Protein GI | 121998681 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family
[TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAGCG CCATGGCACG TCGCCGGTTG AAATTCTGGG CACCGGCGCT GGTCCTGCTG
CTGCTGATCG CCGCTGCCCT GGCCACCGTC GGCTACCTGA CCCTGGGACA CGTTCCCGAG
GGACCGGAGC GCGCCAATGC GCTGCTCGCC CTGGGAGGCG CCGGCGCGGT GCTCATCGGC
GCCACCGTGG CCATCTGGAT CCTCCTGGAC GCCACCGTCA TCCGCCCCCT GGGCGCGCTG
GCCCGCGGGG CGTCGATCAT GGCCCACTCG AACCCGGCCC ACGAACTGGA GATCCCGAGC
ATGCACCTGC TCGGCGAGCT CCCGGAGAGC CTACAGACGC TGGGCAGCAA CCTCTATGAG
ACCCGGCGCG AAGTGGCCAA GGCCCTGGGC TCCGGCGCCC AGGGGGTCGA GAACCAGAAG
ACGCGGCTGG AGATCGTTCT GCGCGAGATC CAGCAGGGGG TCATCGTCTG CGACACCGAG
GGCCGGGTGC TGCTCTACAA CCCGGCCGCC GGCGAGATCC TGCGCAGTGA TGCACTGGGT
CTGGGGCGCT CCATCTACGA CGTGCTGGCC CGCTCGGCGG TGGACCACAC CCTGGAGATG
CTCCAACACC GCCTGGCCAT CGCCGACGAC CACACCGTGG CGGAAAACCG CGCCGAATTC
GTCTGCGCGA CGGTGGATGA CGGCGCCCTG CTGCACTGCC GGATGAGCCT GCTCCCCTCC
TCCAGCCCCC TGCGCTCGGG GTTCGTGCTG ACCATCGAGG ACATCACCCG CAAGATTGAA
GGCGTAGCCC GCCGCGACCA CGCCCTGCGC ACCGCCGTGG AGGCCCTGCG CCCGCCGCTG
GCGAACCTGC GCGCCGCCGC CGAGAGCCTC GGCCAGGGCG ACGAGGCCAT GGCCCGCGAG
CAGCGCCAGT CGTTCGAGAC GCTCATGGTC CACGAAAGCC GGGAGCTGAG CCGACGCTTC
GAGCGCATGG CCCGGGAGAC CCACCGACTC GTCTCGGCCC CCTGGACCAT GGCGGACATC
AGCAGCGCGG ACCTATTGGC CAGCGTCCTG CGCCGCCACC CGGAGGGATT GCCGAAGGTC
GAGGTGGTCG GCATCCCGCT GTGGATGCAC GCCGAGAGCC ACTCCATCGG CCTGGTACTG
GAGCACATGC TGCGCCACCT GCGCGGCGAA CTCGGCATCG AGCAGATCCG CGCCGAGCCC
CTGATGGGGG ATCAGCGGGT GTATCTGGAT CTCTCCTGGC AGGGCCCACC GATCCCGCCG
GATCAGCTCG AGACGTGGCT GGACGAGGAG CTGCCCGAGG CCACCGGGCA ACTGACCCCG
CGCGGGGTGC TGGAGCGCCA CGACAGCGTC GCCTGGAGCC AGATACAACC TCGCTGCGAA
GGACGCGCCC TGCTGCGCAT CCCGGTGCCG CTATCGCGGC GCCAGTGGGA GCAGCCCGGC
GAGCGCCTGC CACCGCGGCC GGAGTTCTAC GACTTCTCGC TGGCCGACCA GGCCGCCGAT
CAGGGCGAGC TGCTCGATCG CCCCCTGGCC CAGCTATCAT TCGTCATCTT CGATACCGAG
ACCACCGGAC TGGCCCCCTC GGAAGGCGAC GAGATCATCT CCATCGCCGG GGTACGCATG
GTCAATGGCC GCATCCTCGA GGGCGAGTGC TTCGAGCAGC TGGTCAACCC CGGGCGGCCG
ATCCCCAAAG CGTCGATCAA GTTCCACGGC ATCCGCGACG AGATGGTCGC CGACAAGCCG
GGGATCGCCA CGGTGCTGCC GCAGTTCAGC GCCTTCGTCG GCGATTCCGT GCTGGTCGCC
CATAACGCCG CCTTCGACAT GAAGTTCATC CGCCTCAAGG AAGGTCAGTG CGGCCTGAAG
TTCGAAAACC CGGTGCTCGA CACCCTGCTG CTGTCGGTCT TCCTGCACGA TCACACCCCT
GAGCACACCC TGGAGGCCAT CGCCAACCGC CTGGGGGTGG AGATCAGCGG CCGCCACACG
GCGCTGGGCG ACACCCTGGT CACCGGCGAG ATCTTCGCGC AGATGCTGCC GCTGCTCGAG
GAGCGCGGCG TCACCACCCT GCGCGATGCG ATCAACGCCT CCGAACAGAT GGTCGAGGTC
CGCAAGCAGC AGGCCCAGTT CTAA
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| Protein sequence | MASAMARRRL KFWAPALVLL LLIAAALATV GYLTLGHVPE GPERANALLA LGGAGAVLIG
ATVAIWILLD ATVIRPLGAL ARGASIMAHS NPAHELEIPS MHLLGELPES LQTLGSNLYE
TRREVAKALG SGAQGVENQK TRLEIVLREI QQGVIVCDTE GRVLLYNPAA GEILRSDALG
LGRSIYDVLA RSAVDHTLEM LQHRLAIADD HTVAENRAEF VCATVDDGAL LHCRMSLLPS
SSPLRSGFVL TIEDITRKIE GVARRDHALR TAVEALRPPL ANLRAAAESL GQGDEAMARE
QRQSFETLMV HESRELSRRF ERMARETHRL VSAPWTMADI SSADLLASVL RRHPEGLPKV
EVVGIPLWMH AESHSIGLVL EHMLRHLRGE LGIEQIRAEP LMGDQRVYLD LSWQGPPIPP
DQLETWLDEE LPEATGQLTP RGVLERHDSV AWSQIQPRCE GRALLRIPVP LSRRQWEQPG
ERLPPRPEFY DFSLADQAAD QGELLDRPLA QLSFVIFDTE TTGLAPSEGD EIISIAGVRM
VNGRILEGEC FEQLVNPGRP IPKASIKFHG IRDEMVADKP GIATVLPQFS AFVGDSVLVA
HNAAFDMKFI RLKEGQCGLK FENPVLDTLL LSVFLHDHTP EHTLEAIANR LGVEISGRHT
ALGDTLVTGE IFAQMLPLLE ERGVTTLRDA INASEQMVEV RKQQAQF
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