Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1874 |
Symbol | |
ID | 4711173 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 2048811 |
End bp | 2049308 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639856347 |
Product | putative nucleoside-diphosphate-sugar epimerase |
Protein accession | YP_001003440 |
Protein GI | 121998653 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.943983 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAATC CGCTGGACTA CCCGCGCTTC CCCTTCCGGG CCGGGGCGAG CGCGACCACC GCGGCACCGC TGCCGGCGGT TTGGGAGCAG TGCGTGTCCA TCGGTGGGCC CAACCGCTAC TACTACATGA ACCCGCTGTG GAGCCTGCGC GAGTCCCTGG ATGCGCTGCT CGGCGGCCGC GGGCTCAGTC GGGGGCGGCC GTTGCACACC GATCTGCGCC CCGGCGACGT CATCGACTCC TGGCGGGTGC TGGTGGTGGA GCCCCAGGAG CGCCTGGCGC TCGGCTTCGG CATGAAGGCC CCGGGCACCG GAGTGCTCGA GTTTACCGTG CAGCCCCACG AGCGGCGGGA AACCCAGGTG CGGGTGACGG CGTACTGGTC CCCGCGGGGG GTGCCGGGGC GCATGTACTG GTACGCCATG GAGCCGGCGC ACGCCGTGCT GTTCAAGGGG CTGGCACGGG CAATCTGCCG ACGGGCAGAA AGGCAGTTCG CGGGCTGA
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Protein sequence | MTNPLDYPRF PFRAGASATT AAPLPAVWEQ CVSIGGPNRY YYMNPLWSLR ESLDALLGGR GLSRGRPLHT DLRPGDVIDS WRVLVVEPQE RLALGFGMKA PGTGVLEFTV QPHERRETQV RVTAYWSPRG VPGRMYWYAM EPAHAVLFKG LARAICRRAE RQFAG
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