Gene Hhal_1728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1728 
Symbol 
ID4710548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1894957 
End bp1895739 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content69% 
IMG OID639856196 
ProductABC transporter related 
Protein accessionYP_001003294 
Protein GI121998507 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1121] ABC-type Mn/Zn transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.968489 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCCAG TGCAGCCGTT AGCTGGTAGG CAGGCCGCTG ACGATCCGCT GATCCGTCTC 
CAGGAGGTGG CCGTGACCTT CGGCGGGCGA TCCATACTCC AGGATGTCCG CCTGGAGGTG
GTGCCCGGCC GGATCACCAC CCTGGTCGGC AACAATGGCG CCGGCAAGAC CACCCTGCTG
CGGGTGGTGG TTGGGCTCAC GCATACGGCT GCCGGGCGGG TCTGGCGGGC CCCGCAGGTG
CGCATCGGCT ACGTTCCGCA GCACTTCTCG GTGGACGCCA ACCTGCCCAT TACGGCACGG
CGGTTCATGG CGCTGTCCGG GCGTGCCAAC GCGGCGCGTT GGCAAGAGGT GGTGGCCGAT
ACCGGGGTGG AGGAGCTCCT CGATCAGCCC CTACAGGGAC TGTCCGGGGG CGAGATGCGC
CGGATCCTGC TCGCCCGGGC GCTGCTTCAG CACCCGTCGG TGCTGGCCCT GGACGAGCCG
GCTGCCGGCC TGGATGGGCG TAGCCAGGGC GCGCTGTATC GGCTGATCGG TACGCTGCGC
CAGCGTTACG GCTGCGCGGT GGTGATCATC TCCCACGACC TGAACCTGGT CATGGCGGCC
AGCGACGAGG TGCTCTGCCT GGAGCACGGC CGGATCGCCT GCCGTGGCGC GCCGGCGTCG
GTGATCGAGC ATCCTGAGTA CCAGAAGCTC TTCGGTTCAC ACCTGGGGCC GGACACCGGG
GTGTTTCCCC ACGATCACCA CGACCATTCG GGCCCTGCCC TGGCAGGAGG TGGCCGTGGA
TGA
 
Protein sequence
MSPVQPLAGR QAADDPLIRL QEVAVTFGGR SILQDVRLEV VPGRITTLVG NNGAGKTTLL 
RVVVGLTHTA AGRVWRAPQV RIGYVPQHFS VDANLPITAR RFMALSGRAN AARWQEVVAD
TGVEELLDQP LQGLSGGEMR RILLARALLQ HPSVLALDEP AAGLDGRSQG ALYRLIGTLR
QRYGCAVVII SHDLNLVMAA SDEVLCLEHG RIACRGAPAS VIEHPEYQKL FGSHLGPDTG
VFPHDHHDHS GPALAGGGRG