Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1728 |
Symbol | |
ID | 4710548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 1894957 |
End bp | 1895739 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639856196 |
Product | ABC transporter related |
Protein accession | YP_001003294 |
Protein GI | 121998507 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.968489 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCCCAG TGCAGCCGTT AGCTGGTAGG CAGGCCGCTG ACGATCCGCT GATCCGTCTC CAGGAGGTGG CCGTGACCTT CGGCGGGCGA TCCATACTCC AGGATGTCCG CCTGGAGGTG GTGCCCGGCC GGATCACCAC CCTGGTCGGC AACAATGGCG CCGGCAAGAC CACCCTGCTG CGGGTGGTGG TTGGGCTCAC GCATACGGCT GCCGGGCGGG TCTGGCGGGC CCCGCAGGTG CGCATCGGCT ACGTTCCGCA GCACTTCTCG GTGGACGCCA ACCTGCCCAT TACGGCACGG CGGTTCATGG CGCTGTCCGG GCGTGCCAAC GCGGCGCGTT GGCAAGAGGT GGTGGCCGAT ACCGGGGTGG AGGAGCTCCT CGATCAGCCC CTACAGGGAC TGTCCGGGGG CGAGATGCGC CGGATCCTGC TCGCCCGGGC GCTGCTTCAG CACCCGTCGG TGCTGGCCCT GGACGAGCCG GCTGCCGGCC TGGATGGGCG TAGCCAGGGC GCGCTGTATC GGCTGATCGG TACGCTGCGC CAGCGTTACG GCTGCGCGGT GGTGATCATC TCCCACGACC TGAACCTGGT CATGGCGGCC AGCGACGAGG TGCTCTGCCT GGAGCACGGC CGGATCGCCT GCCGTGGCGC GCCGGCGTCG GTGATCGAGC ATCCTGAGTA CCAGAAGCTC TTCGGTTCAC ACCTGGGGCC GGACACCGGG GTGTTTCCCC ACGATCACCA CGACCATTCG GGCCCTGCCC TGGCAGGAGG TGGCCGTGGA TGA
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Protein sequence | MSPVQPLAGR QAADDPLIRL QEVAVTFGGR SILQDVRLEV VPGRITTLVG NNGAGKTTLL RVVVGLTHTA AGRVWRAPQV RIGYVPQHFS VDANLPITAR RFMALSGRAN AARWQEVVAD TGVEELLDQP LQGLSGGEMR RILLARALLQ HPSVLALDEP AAGLDGRSQG ALYRLIGTLR QRYGCAVVII SHDLNLVMAA SDEVLCLEHG RIACRGAPAS VIEHPEYQKL FGSHLGPDTG VFPHDHHDHS GPALAGGGRG
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