| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1166 |
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| Symbol | |
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| ID | 4710157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 1272620 |
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| End bp | 1274872 |
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| Gene Length | 2253 bp |
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| Protein Length | 750 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639855639 |
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| Product | formate dehydrogenase |
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| Protein accession | YP_001002743 |
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| Protein GI | 121997956 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGGAAGT GGCGAGCTTT CGATCCCCGT CGGCGAGCCC TGCTTCAGGG GAGTCTGGCG
GCTGGGGCGG CCACTGCGGT CGGGGTCCCG GAGAGTGCGC AGGCCCATCC CCGGGTACCG
CGTAGTGCGG AACCTGCGCG AGCGATGGAG GACCACGTCT TCAGCTGGTG CAATCTTTGC
CCCTGGCGCT GCGGTGTCAT CGTCCGCCGC GATGACAACG GCCGGATCGC GCGTCTGGAG
GGCAATCCTG ATCACCCCCA GAACGAGGGG TTGCTGTGCT CCCGCGGGCA TGCCGGGGTC
ATGGATGTCT ACAACCAGGA TCGGATCAAG CAGCCGCTGC TGCGCGACGG GCCGCGCGGC
AGCGACCGCT GGCGGCCGGT GAGCTGGGAC GAGGCGCTGG ACTTGATCGG CGAACGCTTG
CGTGCGGTTC GCGATGAGCA CGGCCCACAG GGGATTTCCG TTCTCGCGCA CAGCTACTGG
AAAAAGCCCT ATCACCGTCT GGCTCAGGCG CTCGGCACGC CCAACTTCAT CGATTCGGTC
TGGGCCATGT GCCTCGGTCC GCGAATGCTC TCCTACGAAC TGGTGGCGGG CCGTCCGCTG
ACGGGCATTG AGACGCTGGA CGTGCGCCGT ACCCGCTACT TCCTCATCTT CGGACGCAAT
CTGGCCGAGT CGTTCCTGAA CGGCGAGGTC CGTGACTGGA TGCGGGCGCT CGCCGATGGC
GCCAAGAGCG TCTACGTCGA TCCGCGTCAC ACCATCACGG CTGATCGCTC CCACGAATGG
CTCCCGATCC GGCCGCTGAC GGACCACGCC TTGGTCCTTG CGCTCATCCA TACGGTCATC
GAGGAGGAGC TCTACGATTC GGCCTTCGTC GAGGACTACT GCACCGGCCT CGACGAGCTA
CGGGAGCGGG TGGCCGGCTA TACACCCGAG TGGGCCGCCG AGGAGACCGA CATCGACGCG
GCGGACATCC GGCGAATCGC CCGGGAGATG GCCGAGGCGG CGCCTGCGGT TCTCGCCTAT
GCGCCGCGGC GGATGGCACG CACGCGCAAT GACGTGGGTC TGGGGGTTGC GATCGCCGTG
CTGAACAGCC TGTTCGGCGT TTGGGATCGG CACGGCGGGA TCTTTCGGCC CCAGCGTCTG
GAGATCCCGG AGCCGGATCT GCCGGAATTC CCGGAATCGG CCGCGGAGCC GATCGATGGG
ACCGGTGTCC CCGATCGCTA CCCGCTCGCC AACCCGCAAT TCGGGTTGGC GAGCACGTTT
TGGTCGGCGC TGGCGGCGCA GGATCCGTAT CCGGTCAAGG CGATGATCGC CGCCGGCAAC
AATGCCATGA AGAACACCGG GTTCCCGGGG GTGGTCCGGA GGGCGATCGA TCAACTGGAC
CTGTTCGTTG CCACCGATAT CCAGCCCAAC GAGACGAACC GTCTGGCCGA TGTCATCCTG
CCGGAACCCA GCGCCTTGGA GCGCTACGAC GACCTCCAAG AGGGCTGGGG ATACCGGGGT
TGGATCGCCG TGCGCATGCC GGGGATGGAG GCGCTCCACG ACACCCGGGA CCCCTGGCGG
ATCTGCCAGG GTATCGCTGC ACAACTCGGC CTGGAGGACT ATTTCCCCCA CGGCAGCGTG
CGCGAGCTCA TCGAGGACCG CCTGGAGAAG GCCGGGTACG ACTTCGAGGC GCTCGCCGAG
AAGGGCGTGA TCACGACGGA GGCGGATCCG GCCCACAACT TCCCCCGGGA GCACGGGGCG
TCGTCACGGT TCGACACCCC CAGCGGCAAG GTTGAGCTGG TGCCGTCGCG GCTCGTGGAG
CACGGGCTGG ACGATGCCCT GGATTACCGT CGCGAGGTCG AACGCGGAGG CGGAGAGCTG
CACTTTCTCT TCGGACGTGT CAGCTTCCAC ACGCATACGC GTACCCAGAA CAACCCCTGG
CTGGCCGGGT TCATGGAGGA GAACCCGCTC TGGATCCATG AAGAGACCGC CTCGGAGCGC
GGCATTGTCG ACGGAGATAC CGTCGAGGTG ATCGACAGCC GGGGGTGTCG GGAGGTATTC
CACGCCCGGG TCACCGCACG GATCCGTCGC GATGCCGTCT ACACCGCGCA CGGCTACGGG
CGTGATGATC CAAGACTCTC CGTGGCCCAC GGTCGCGGTG GATCTGCAAC CACCTTTGCC
AGTCCGGATA TCGATCCGAC CAGTGGTGCC GCGGCCATGC TGCGCGGGCT GGTCCACGTG
CGCCGTATTG AGCCTTCCGA GGGGGTCTCA TGA
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| Protein sequence | MRKWRAFDPR RRALLQGSLA AGAATAVGVP ESAQAHPRVP RSAEPARAME DHVFSWCNLC
PWRCGVIVRR DDNGRIARLE GNPDHPQNEG LLCSRGHAGV MDVYNQDRIK QPLLRDGPRG
SDRWRPVSWD EALDLIGERL RAVRDEHGPQ GISVLAHSYW KKPYHRLAQA LGTPNFIDSV
WAMCLGPRML SYELVAGRPL TGIETLDVRR TRYFLIFGRN LAESFLNGEV RDWMRALADG
AKSVYVDPRH TITADRSHEW LPIRPLTDHA LVLALIHTVI EEELYDSAFV EDYCTGLDEL
RERVAGYTPE WAAEETDIDA ADIRRIAREM AEAAPAVLAY APRRMARTRN DVGLGVAIAV
LNSLFGVWDR HGGIFRPQRL EIPEPDLPEF PESAAEPIDG TGVPDRYPLA NPQFGLASTF
WSALAAQDPY PVKAMIAAGN NAMKNTGFPG VVRRAIDQLD LFVATDIQPN ETNRLADVIL
PEPSALERYD DLQEGWGYRG WIAVRMPGME ALHDTRDPWR ICQGIAAQLG LEDYFPHGSV
RELIEDRLEK AGYDFEALAE KGVITTEADP AHNFPREHGA SSRFDTPSGK VELVPSRLVE
HGLDDALDYR REVERGGGEL HFLFGRVSFH THTRTQNNPW LAGFMEENPL WIHEETASER
GIVDGDTVEV IDSRGCREVF HARVTARIRR DAVYTAHGYG RDDPRLSVAH GRGGSATTFA
SPDIDPTSGA AAMLRGLVHV RRIEPSEGVS
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