| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1081 |
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| Symbol | |
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| ID | 4709873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 1174697 |
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| End bp | 1175665 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639855552 |
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| Product | patatin |
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| Protein accession | YP_001002659 |
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| Protein GI | 121997872 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.983144 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACACGAG ACCTGCCCGA TCGCCCGCGA CGGCATACCC TGAAGATGAT GGTCAGCGCA
TCCATGTTGC CGCTGGTGGG GATGTCGGCG GCCCCCCTCT CCGGTGCCCG GGCCGCCGAA
GGGGAGGGCG GGCCGCGTAT TGGCCTGGCG CTGGGCAGTG GCGGGGCCCG CGGCCTGTCC
CACCTGCTGG TCTTCGAGGC CCTCGAGGAA CTCGGTGTGC GGCCGCACCG GATCAGTGGC
TGCAGCATCG GCGCCATCAT GGGCGCGCTC TACGCGGCCG GCCTGAGCGC CGAAGAGATC
CGCGCGGGGA TCGACGAACT CGTCGCCGAT CAGGACGAGA ACTGGCTGCG GACCCTGATG
GGCGGCAAGT GGCGACAGTG GCTGGACTTC GTGCAGCCGT CCGGGCGCGA CGGCGGGCTG
GTAGAGTCCG ACGCCTTTAT CGCTCACCTG CGTAAAAAGA CCGGTGTATC GCGCTTCGGT
GAACTCGAGA TCCCGCTGCA GGTGGTGGCC ACCGACTACT GGGAGCGTGA GGCGGTGGTC
TTCGACGCCG GGGCGCTCTG GCCAGCGGTG CAGGCGAGCA TGGCGATGCC CGGGCTGTTC
AGCCCGGTGT CCTACCGCGA CCGCGTGCTG GTGGATGGCG GGCTGACCAA TCCGGTGCCC
TTCGATCTGC TTAGCGAGGA TTGTGATGTG GTCGTGGCGG TGAACGTGCT CGGCAGTCGC
GAGGAGGGCG GGGGCGAAAC CCTGAACAAT CCCGCCTATC TGGACAACAT CTTCAACACC
TTCCAGATCA TGCAGTACTC GATCCTGCAA GAGAAGAGAC GGCGCGAGGC GCCGGATATT
CTCATCAGCC CGGAGATCCG CGATATCCGC GTGCTCGACT TCCACAAGGT GGACACCATC
CTCGAGCAGG CGCAGTCCGA GGTCGATGCC CTGCAAGACG AGCTGCGCGA GCTGCTCGAC
CAGTGGTGA
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| Protein sequence | MTRDLPDRPR RHTLKMMVSA SMLPLVGMSA APLSGARAAE GEGGPRIGLA LGSGGARGLS
HLLVFEALEE LGVRPHRISG CSIGAIMGAL YAAGLSAEEI RAGIDELVAD QDENWLRTLM
GGKWRQWLDF VQPSGRDGGL VESDAFIAHL RKKTGVSRFG ELEIPLQVVA TDYWEREAVV
FDAGALWPAV QASMAMPGLF SPVSYRDRVL VDGGLTNPVP FDLLSEDCDV VVAVNVLGSR
EEGGGETLNN PAYLDNIFNT FQIMQYSILQ EKRRREAPDI LISPEIRDIR VLDFHKVDTI
LEQAQSEVDA LQDELRELLD QW
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