Gene Hhal_0923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0923 
Symbol 
ID4710398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand- 
Start bp996893 
End bp997510 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content72% 
IMG OID639855392 
Product3-beta hydroxysteroid dehydrogenase/isomerase 
Protein accessionYP_001002501 
Protein GI121997714 
COG category[R] General function prediction only 
COG ID[COG2910] Putative NADH-flavin reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTG CGGTGTTTGG TGGGACCCGC GGCGTCGGGG CCGAGGTGGT GCGCCAGGCC 
CTGGGGCGCG GATGGCGGTG CCGGGTGCTG GCGCGCAGCG CCGATCGGGT GCCGGAGCTG 
CCCGGGGTCG AGGTGGTGGT CGGCGACGTG CTCGATCCCG AGGCCGTGGG CCGGGCCCTC 
TACGACTGCG ATGGCGCGGT CATCGCCCTG GGGCAGACCC GTCGCAACCC GCCGCGGTTG 
TGCAGTGAGG GCACCCGGGT GATCGTCGAG GCCATGCAGC AGCAGGGCGT CCCGCGGGTG 
GTGGCGGTCT CGGCCATGGG GGTGGGGGAC AGCTACGCCC AGGTGTCGGT GGTCTTCCGG 
CTGCTGATCC GCACCCTGAT GAAGGGTCTG ATGACGGATA AGGAGCGCCT CGAGCAGGTC 
CTGGCTGCCA GCGATCGCGA CTGGGTGGTG GTGCGCCCCG GGCGGCTGAC CAACCGACCG 
GGGCGGGGCG AGTGGCGCGC CGGCACGGAT CACGACACCG GCGCCGGGTC GGTCAGCCGG 
GCCGATGTGG CGACGTTCCT GCTCGAGCAG CTGGGCGACG ACCGTTACCT GCGTCAGGCG 
CCGTACATCA CCGGGTGA
 
Protein sequence
MKIAVFGGTR GVGAEVVRQA LGRGWRCRVL ARSADRVPEL PGVEVVVGDV LDPEAVGRAL 
YDCDGAVIAL GQTRRNPPRL CSEGTRVIVE AMQQQGVPRV VAVSAMGVGD SYAQVSVVFR 
LLIRTLMKGL MTDKERLEQV LAASDRDWVV VRPGRLTNRP GRGEWRAGTD HDTGAGSVSR 
ADVATFLLEQ LGDDRYLRQA PYITG