Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_0803 |
Symbol | |
ID | 4709700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 884800 |
End bp | 885348 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639855262 |
Product | dual specificity protein phosphatase |
Protein accession | YP_001002381 |
Protein GI | 121997594 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2453] Predicted protein-tyrosine phosphatase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.265228 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACGCA TACGTAAACT TTGGCACGCC ACCGTGGACC TGCTTGAGGG GGCATTCCTC AACGGCTGGC AGGCGTTTTT CCAGACGGTG GGCTACTACC GGCTGATCCC GATCGAGCCG GGCGTCCTCT ACCGCACCAC CGAGATGCCG CCCCAGCGCC TGGTGGCGCT GTGCCGGGCG CAGGGCGTGC GTACCGTGAT CGACCTGCGC CGCAAGGCCC ATCGGGCCGA GGCCGAGGCG GCAGCGCTCG AGCCGGCCGG GATCCGCCAC GTGCATCTCC CCTCGGCGCA GGTGCCCGAT GCATCCACGG TGGCGGCGTT CCTCGAGCTG ATGGACGACC CCGCCAACGG GCCCGTGGTG ATCCACTGCG TCCACGGTGT CGGCCGCACG GGCGCATTGA TGGCGGTCTA CCTCATGGAG TACCGCGGCC TGGACAACGA ATCGGCCCGG CGGGCGGCCA AGCGCATCGG TGGTTTCCAG AGTTTCGGGC GCGGACGGCC GAAAGGCGAG TTCGTGCTGC ACTACGCACC CCGCCCGAGG AGCGCGTAA
|
Protein sequence | MKRIRKLWHA TVDLLEGAFL NGWQAFFQTV GYYRLIPIEP GVLYRTTEMP PQRLVALCRA QGVRTVIDLR RKAHRAEAEA AALEPAGIRH VHLPSAQVPD ASTVAAFLEL MDDPANGPVV IHCVHGVGRT GALMAVYLME YRGLDNESAR RAAKRIGGFQ SFGRGRPKGE FVLHYAPRPR SA
|
| |