Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_0360 |
Symbol | |
ID | 4711350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | + |
Start bp | 418330 |
End bp | 419265 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639854823 |
Product | auxin efflux carrier |
Protein accession | YP_001001956 |
Protein GI | 121997169 |
COG category | [R] General function prediction only |
COG ID | [COG0679] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.335711 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCGGGCG CCCTGGTCAG CGCCCTGGCG GCGGTCTTCG GGCTCATCGC CCTGGGCCAC CTGCTACGCC GCCATGAGGT CGTTCCGCCC CTGTTCTGGG ACGGGGCGGA ACGGCTGACC TACTACTTCG CCCTGCCGGC GCTGCTGGTG GTGCGCTTGG CCGAGGCGCC CCTGCGCGAG ATGCCGCTGC TGCCGGTGGT GGCCATCCTT GCCGGCGGCG TGGCCATCGC CGGCGCCCTG CTGTTCCTCG CCCGGCCGCT GCTCGAGCCG GACGGCCCGG GGTTCACCTC GGCCCTACAG GGTACCTTCC GGCCCAACAC CTACGTGGGC CTAGCCACCG CGGCGGCGCT GTTCGGCGCT GAGGGCGTCA CCCTGGCGGC GATCAGCCTG GCCGTACTCG TCCCGCTGGT GAACCTGCTG GCCGTCGCCG CGCTGATCCG CTATGGCCGC AGGACCGGGC AGCGGGCACC GGGCTTTTGG GGTAGCCTGG GGCGCAACCC GCTGGTTCTC GCTTGTCTGG TCGGGGTCAC ACTCAGCCTG CTGCCTCTGA ATCTGCCCAC ACCGGCGGCC GCCTTCCTCG ACGGCCTAGG TCAGGCCGCC CTTCCCCTGG GCCTGATGGC GGTGGGCGCC GGGCTGTACT GGGGACAGAT CGGGCGCCAC CCGCGGCTAC TCATCGCCGC ATCGGCCATC AAGCTCCTGC TGCTGCCCGC CGGCGTCGGC GCCGTGGCCC TGGCGGCGGG CCTGGATTCG ACCACCGGGG CGGTGCTGGT GCTCTTCGCC GGGGTACCGG CCTCCGCCTC GTGCTACATC CTCGCCCGCC AGCTCGGCGG CGACGCGCCG CTCATGGCCT CGATCCTCAC CGTGCAGACC ATCGCTGCCG TGGCCACCCT GCCGCTGGTG GTGGGGGGCT TCCTGGCGGT CAGCGGTGGG GGATAG
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Protein sequence | MAGALVSALA AVFGLIALGH LLRRHEVVPP LFWDGAERLT YYFALPALLV VRLAEAPLRE MPLLPVVAIL AGGVAIAGAL LFLARPLLEP DGPGFTSALQ GTFRPNTYVG LATAAALFGA EGVTLAAISL AVLVPLVNLL AVAALIRYGR RTGQRAPGFW GSLGRNPLVL ACLVGVTLSL LPLNLPTPAA AFLDGLGQAA LPLGLMAVGA GLYWGQIGRH PRLLIAASAI KLLLLPAGVG AVALAAGLDS TTGAVLVLFA GVPASASCYI LARQLGGDAP LMASILTVQT IAAVATLPLV VGGFLAVSGG G
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