Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_0164 |
Symbol | |
ID | 4710812 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 193220 |
End bp | 193933 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 639854622 |
Product | hypothetical protein |
Protein accession | YP_001001760 |
Protein GI | 121996973 |
COG category | [S] Function unknown |
COG ID | [COG3455] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03349] type IV / VI secretion system protein, DotU family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.431152 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATCGCGG CGGAGCAGGC TGCGTCGCCG CCGACGTCGA CGGGGTCGCT GCTGGAGGTG GCGGAGCCGC TGTTGCGCGA AGCAGCGTCA CTGCGTGACG GCCGAATCGC TGCAGCGCAG GGAGATGGGC TGCGTGAGCG GGCGCGGCAG ACGCTGGAGC GGTTGCGGGA ACGGGGCCTC GCCGCCGGCC TGGGCGATGC CGCCCTGGCC GATGCCGAGC GGGCGGTGGT GGCGTTCCTG GACGAGGCGG TGATCGCCTC GGCGCATCCG GAGCGGGCGG CGTGGCTGGC GCAACCGCTC CAGGTCGAGC GCCTCGGCGA ACGCGCGTCG GGTCAGCGTT TCTTCCAGAG GCTGGAGGGC CCTCGCGAGC AAGCCCCGCC GGCGGCGGTC CTTGAGCTGT ACCTGGCCTG CCTGTGGCTC GGCTTCCAGG GAGTCCACGC TCTGGAGGAT CAGGCGCTGC TTGATGCGCA TCGCCATCGG CTCGGCGAGT GGCTGGCCGA CCGGACGCCC GCGGCACCCC CGCCGCCCCC GGCGTCGGCG GGCACGGATC GGGGTGCCGG TCAGCATGTG GGCTGGTTCT GGTCGGCGGT GGCGGTGCTT GCTCTCGCGG CGCTGGCCTA TCTCCACACC GGGGTGCAGG TGGAGCGGGC CGCCGAGGCT GCCGCCGAAG AGATCGAGGC TGCCCGGGAG GTGTTGCGGA GGGGCACGCC ATGA
|
Protein sequence | MIAAEQAASP PTSTGSLLEV AEPLLREAAS LRDGRIAAAQ GDGLRERARQ TLERLRERGL AAGLGDAALA DAERAVVAFL DEAVIASAHP ERAAWLAQPL QVERLGERAS GQRFFQRLEG PREQAPPAAV LELYLACLWL GFQGVHALED QALLDAHRHR LGEWLADRTP AAPPPPPASA GTDRGAGQHV GWFWSAVAVL ALAALAYLHT GVQVERAAEA AAEEIEAARE VLRRGTP
|
| |