Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_0116 |
Symbol | |
ID | 4710747 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 131052 |
End bp | 132056 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639854574 |
Product | lipoyl synthase |
Protein accession | YP_001001712 |
Protein GI | 121996925 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0320] Lipoate synthase |
TIGRFAM ID | [TIGR00510] lipoate synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCCGAGT TCAAGGGGAT TCCGGTGAGC AGCGGCAGCG TGGTCGAGCG CGATGGGGTG CGTACCATCA AGGACGGTGT TAAGCGCCGT GATGATGGCC AAGGGGCGGT GCGTCGGCGC AAGCCCCAGT GGCTCAAGGC CCGCGCGCCG GGCGGAGAGG GCTACCGAAG CGTGCGCGGC ATTGTCCACG ACCACCACCT GAGTACCGTG TGCGAGGAGT CCCACTGTCC CAACCTCGGG GAGTGCTGGA GTCACGGCAC CGCCACCTTC ATGGTGCTCG GGTCGGTCTG TACCCGTACC TGCCGTTTCT GCTCGGTGGA TACCGGGAAC CCCAAGGGGC GGCTGGATCC CCAAGAGCCG GAACACTGCG CCGAGTCAGT CCGTCTGATG GGGCTGCGGT ACGTGGTGCT GACCTCGGTG GACCGGGATG ATCTGCCCGA TGGCGGCGCA GAGCACTACG CCCAGTGCGT CCGTGCGATC AAGGCCGATA ATCCGGATAC CGCCGTTGAG GCCCTGACGC CGGACTTTCG GGGCGACGAG GAGGCTGTGC GCACCGTGGT CGATTCCGGG TTGGAGGTCT TCGCCCACAA CGTCGAGGTG GTCCGACGCC TGTCGCCGCA GGTGCGTGAT CCGCGCGCCG GCTACGAGCA GAGCCTGGCG GTGCTTCAGG TGGCCAAGCG GTTGCGCCCC GGGGTGCTGA CCAAGTCGAG TTTGATGGTC GGTCTCGGCG AGACCGACGC GGAAATCGAC GAGGCGTTCG ATGACCTGCT TCGGGCGGAG GTCGACATCG TCACCCTCGG GCAGTACCTG CAGCCGACCC GCAACCACCT CCCAGTGGAG CGTTTCGTGA GTCCCGACGA ATTCGAGGCC CTTCGGCAAG AGGGGCTCAG GCGTGGGTTC CGCGAGGTTG TAGCTGGGCC GCTGGTGCGC TCGAGTTACC GCGCCGACCG GGTGCTGGAG GGGAACAACG TCGGCCTTCC CTCCGTCGGA CCGGACGTTG GCTGA
|
Protein sequence | MSEFKGIPVS SGSVVERDGV RTIKDGVKRR DDGQGAVRRR KPQWLKARAP GGEGYRSVRG IVHDHHLSTV CEESHCPNLG ECWSHGTATF MVLGSVCTRT CRFCSVDTGN PKGRLDPQEP EHCAESVRLM GLRYVVLTSV DRDDLPDGGA EHYAQCVRAI KADNPDTAVE ALTPDFRGDE EAVRTVVDSG LEVFAHNVEV VRRLSPQVRD PRAGYEQSLA VLQVAKRLRP GVLTKSSLMV GLGETDAEID EAFDDLLRAE VDIVTLGQYL QPTRNHLPVE RFVSPDEFEA LRQEGLRRGF REVVAGPLVR SSYRADRVLE GNNVGLPSVG PDVG
|
| |