Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_5260 |
Symbol | |
ID | 5737218 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009974 |
Strand | + |
Start bp | 32366 |
End bp | 34042 |
Gene Length | 1677 bp |
Protein Length | 558 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641282424 |
Product | leucine-rich repeat-containing protein |
Protein accession | YP_001548015 |
Protein GI | 159901770 |
COG category | [S] Function unknown |
COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATCGTA ATCCCGTTGG TCGTATCTAT CCTCAGTCCA TCAGTCAGGA CACGCTTCTT GATTATAGCA GTTTGGATTT AACGGATGTC GCATTTCCGC ACCCACCGAA TCGCCCTATT ACAACGCTCG ATCTTTCTCG CAATCAGATC AAAAGGCTGT CGATAAACTC CACCGACGCG AATTTAATTA CACGTATTAT CCTCCATGAC AATGAAATAT CCGACCTGCC AAGCGATATT CGTTCCTTTC GCAACCTTCA GGAATTGTAT GTCGCTGGTT GCCCTTTAAC CACCTTGCCA ACATGGCTGG AAGAATTAAC CCATCTGCGA ATTCTTGATA TCGGTGATAC CGACATGATG GATTGCCCTC CAGTATTACG TCGGCTACCA AACCTCTCAA CTTTGGCTTT AGCCAACTTA CCATGGATGA AACTGCCACA CTGGTTTGGC GATTTGCCAA TCACCACCCT GTCTCTTTAT GGTATGCCCC AATGCGATCT ATCGGTTATT GCAGAATTAA GATCACTCAA TCAGCTTTTT CTGACCAGGA TGCACTATAC ACAAATACCA ACATGGCTAC AAGCATGTAC AAGGTTGACA TTCCTTGATC TCAGTGATAA TCCGATCACT ACACTCCCAC CATGGCTTGG GAAATTATCC TTAGAGACCC TTATCCTTGG ACGCATTCGA TTAGAACGGT ACCCTGATTG GGAACAATGG AATTCGCTAA CGACGCTCGA TCTGGTCGGA TGTGAGAACG CTGATGCGGT TTTTTCAAAG CCCTTCCCTC AATCACTTCA TACATTAATT CTTGACACCT CTACTATTAC GGCAGTTCCT GAATGTATAC GCCTTCTTCG TTCCTTACGT GACTGTCGGC TAGCCCATAC CACGATAACC AGTGTTCCTA CATGGTTATT TGAAGAGGTG GCACTACAGT CCCTGGATCT TTCCTATACG CATCTTGAGT TTCCAGCCCT TACCAAGCCA TCGATGCTCA TAACATTTAT TTTTCGAGGG GGACGTACAT CAACCTGGCC ATCCGTGTTC GATCAGATGC CGATGCTTCA GCTGTTTGAT CTCGAGGATG CTTATTTTGA TGACCCGCTC GTCCAACCAC TGAAGACGAC CTACCATGAT TTAAAGAATT TTACGAGTCC AAGAACGTAC TCTGGTATTC CGTTTGCACT AGCTATGCCT AACCTTCAGA CACTGCATAT GAGTGCTCCT TGGCCCCCGA CATCCGTTGA TACGCTGCAT ATGATGTTGG AACACTGTCC TCAACTTCAA GCGATTTCGC TTCTTGGATG GAACTTGGAT ACCATTCCTA CCAGCATGCA ATCCCTTTCA GATCTTCGTT CTTTAAGCGT ACCGTATAAT CAGATTACGG AAGTTCCGAT ATGGCTCCAA GGCATGACAA AGCTCCGTTC ATTGGATATA TCGCATAATC GGCTTACGCA GATTCCAATA TGGCTCCGAG ATATGCCACA CCTTGAATCG CTTGATCTTT CCGGGAATCC TTTACAGACG TTCCCCTCAT GGTTAAAAGA CATCCCAACG CTCAGTGAGG TCGCCTTCGT GTTCCCACCC GCCAGCCTTC AGTGTGATCA CGTCCTTCCA GAATTTCTGG CGGCAGGGAT TCGGCTGGAT GTCCGACATC CCCGTGATGA CCCGTAA
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Protein sequence | MYRNPVGRIY PQSISQDTLL DYSSLDLTDV AFPHPPNRPI TTLDLSRNQI KRLSINSTDA NLITRIILHD NEISDLPSDI RSFRNLQELY VAGCPLTTLP TWLEELTHLR ILDIGDTDMM DCPPVLRRLP NLSTLALANL PWMKLPHWFG DLPITTLSLY GMPQCDLSVI AELRSLNQLF LTRMHYTQIP TWLQACTRLT FLDLSDNPIT TLPPWLGKLS LETLILGRIR LERYPDWEQW NSLTTLDLVG CENADAVFSK PFPQSLHTLI LDTSTITAVP ECIRLLRSLR DCRLAHTTIT SVPTWLFEEV ALQSLDLSYT HLEFPALTKP SMLITFIFRG GRTSTWPSVF DQMPMLQLFD LEDAYFDDPL VQPLKTTYHD LKNFTSPRTY SGIPFALAMP NLQTLHMSAP WPPTSVDTLH MMLEHCPQLQ AISLLGWNLD TIPTSMQSLS DLRSLSVPYN QITEVPIWLQ GMTKLRSLDI SHNRLTQIPI WLRDMPHLES LDLSGNPLQT FPSWLKDIPT LSEVAFVFPP ASLQCDHVLP EFLAAGIRLD VRHPRDDP
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