Gene Haur_5000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_5000 
Symbol 
ID5736959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009973 
Strand+ 
Start bp2839 
End bp3453 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content61% 
IMG OID641282167 
ProductDNA repair protein RadC 
Protein accessionYP_001547758 
Protein GI159901512 
COG category[L] Replication, recombination and repair 
COG ID[COG2003] DNA repair proteins 
TIGRFAM ID[TIGR00608] DNA repair protein radc 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.982457 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTATTG ATGCCATTCC CACCCTGCTT GCCCTGTTCA ATCCCTCCCG CCCAACCGCT 
CGCGATCAGG CGTGTGCCGC CGCGCTCTGG CAGGCTGCTG ACCAGTCGTG GAATACCCTC 
GCTCGCATGA GCGAGGAGGA GTTAACCCCA CTCGTTGGCC GCGCCCATGC CATTCGGCTG 
CGCACCGCCT TCGCGATTGG CCACGCCAAA CTGGCCGAAG CCGTGACGGG CGAACCGATC 
ACCACACCCA TGCAGGTCGT GGCCTTGCTC CAAGCCGAAA TGAGTCACTT GGAACAGGAA 
GAACTGCGGG TCATCTCGTT GTCAACCCAA GCGCACATCA TCGGCATGCA CACCGTTGTG 
GTTGGAACCC TCAATACCGC CTATTGCCGC ATGGCCGACC TCTTTCGCGA GCCGCTGCGC 
CGCAATGCCG CCTCGGTCAT CCTGGCGCAC AACCACCCGT CGGGGATGGT GTGGGCATCG 
CCCGAGGACA TCCTGCTCAC CAAGCAGGCC ATTCAGGCAG GCCAACTCTT AGAGATTGAG 
CTACTGGATC ATCTGATCAT CGGCAAAGGC GGCTATACCA GCATGCGCGA GCGACGGCTT 
GCGTGGAGTC ATTAA
 
Protein sequence
MAIDAIPTLL ALFNPSRPTA RDQACAAALW QAADQSWNTL ARMSEEELTP LVGRAHAIRL 
RTAFAIGHAK LAEAVTGEPI TTPMQVVALL QAEMSHLEQE ELRVISLSTQ AHIIGMHTVV 
VGTLNTAYCR MADLFREPLR RNAASVILAH NHPSGMVWAS PEDILLTKQA IQAGQLLEIE 
LLDHLIIGKG GYTSMRERRL AWSH