Gene Haur_4945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_4945 
Symbol 
ID5736781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp6271371 
End bp6273056 
Gene Length1686 bp 
Protein Length561 aa 
Translation table11 
GC content51% 
IMG OID641282112 
ProductABC transporter related 
Protein accessionYP_001547703 
Protein GI159901456 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTATCG CTAGCGCTCA GGATGTTCAC TACAGCATTG GTGGTCGAAG TATTCTCAAC 
GGCCTAAATT GGGAAATTCA CGAACACGCC CGCATCGGCT TGGTTGGCTC GAATGGTGCA
GGCAAATCGA CGTTGCTGCG CTTATTGGCA GGCTTTGAAA CGCCGACGGC TGGCCACATT
AGCACACGGC GCGGATTACG CATTGCCTAC CTTTCGCAGC ATATCGTGGG CGATCAGCGC
ACACCGTTGC AAACCGTCAT GGCCGCCCGC CCTGATTTGA CTGAGCTTGA AGCCCAAATT
CAGGCCTGCG AAAACCAACT AGGCGAGCCA GTGATCGCCA ACGATCTTCA GCGGATGAAT
CAGGTTTTAG AGCGTCACAG TCGCCTATTG AACCAATTCG AGGAGCTGGG TGGCTCAATG
CTCTATAACG ATGCTCGTGG CTATTTACAG CAATTTGGCT TCGATGGCAA CGATCTGAAT
TTGCCAACCA ACTCGCTCAG CGGCGGCCAA CGCAAAATGA TCGGCTTGGC TAGCTGTTTG
ATTCAACGCC CTGATTTATT GCTGCTCGAC GAGCCAGAGA CCCACCTCGA TTTGAACCGC
CGCGAGTTTT TAGAGACGAC AATTCGTGAG TTTGCTGGGG CGGTGGTGAT TGTCGCCCAC
GATCGCTATT TGCTCGATGA AACCATCACC AGCGTTGTGC ATTTGGAAGC TGGCAAAACT
AGCCTCTGGC TTGGCAATTA TTCGACCTAC GCCGTCAATC GCCAATTGGC TTTGCAACGC
CAGCAGCAAG ATTTTATGGC GCAACAAAAG GAAATTAATC GCTTAGAAGA AGCAATTAAG
CGCTTTCAAT TGTGGGCATC GTTAGTTCCC AACGAGCGCC ATATCAAGCA GGCGCGGGTC
AAGCAAATGC AGATTGATAA GATGGATAAA GTTGAAAAGC CCGTGTTGGA GCGGCGCAAA
GTCGGCTTGA GCCTACGCTC CGAGCAACGT GGCGGCCAAA AAATCATCGA TCTACGTGAT
GTCAGTATGA GCTTTGGCGA CGATTTAGTG CTTCTGGGAA TTGAACAAAC CATCTGGCGC
GGCGAACGGG TTGGGATCGT CGGCCAAAAT GGCGCGGGCA AAAGTCTGCT TGGTAAGTTG
ATGCATGGGC AATTTGAGCC AAGCGATGGC ATGGTTTGGG TTGGCCCATC GATCGAAATT
GGCTATTTTG CCCAAGGCGT TGAGACGCTT GATCATAGCC AAACGCCGAT TGATGTAGTA
CGCCTCACGC GTTCGATGTA CGAGGGCCAA GCGGTGGCAT TTTTAGGTGG ATTTTTGTTT
AGTTATGCTC AATGTCGCCA AAGCATCGGC TCGCTTTCTG GTGGCGAACG GGCACGCTTG
CAATTAGCAT TGTTGATGTT AGCCAAACCC AATTGTCTAA TTCTTGATGA GCCGACCAAC
CATTTAGATA TTGATTCGGT CGAAGTCTTG GAAGATGCCC TAGAACGCTA CGACGGCACA
GTGATTGTGA TTTCGCACGA CCGCTACTTT CTTGATCGCG TGGTTGATCG AGTTTGGGCT
GTCAATGATG GTAGCATCAA AGCTCACCTT GGCGGCTACA GTGCTTGGCG TGAAGCTAGT
AAAGCCCCGC CAGCGCCCAT TATCGAGCCG GTAGTGGTTA AGACTAAGGC CAAAGTTAAA
CGATAG
 
Protein sequence
MIIASAQDVH YSIGGRSILN GLNWEIHEHA RIGLVGSNGA GKSTLLRLLA GFETPTAGHI 
STRRGLRIAY LSQHIVGDQR TPLQTVMAAR PDLTELEAQI QACENQLGEP VIANDLQRMN
QVLERHSRLL NQFEELGGSM LYNDARGYLQ QFGFDGNDLN LPTNSLSGGQ RKMIGLASCL
IQRPDLLLLD EPETHLDLNR REFLETTIRE FAGAVVIVAH DRYLLDETIT SVVHLEAGKT
SLWLGNYSTY AVNRQLALQR QQQDFMAQQK EINRLEEAIK RFQLWASLVP NERHIKQARV
KQMQIDKMDK VEKPVLERRK VGLSLRSEQR GGQKIIDLRD VSMSFGDDLV LLGIEQTIWR
GERVGIVGQN GAGKSLLGKL MHGQFEPSDG MVWVGPSIEI GYFAQGVETL DHSQTPIDVV
RLTRSMYEGQ AVAFLGGFLF SYAQCRQSIG SLSGGERARL QLALLMLAKP NCLILDEPTN
HLDIDSVEVL EDALERYDGT VIVISHDRYF LDRVVDRVWA VNDGSIKAHL GGYSAWREAS
KAPPAPIIEP VVVKTKAKVK R