Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_4945 |
Symbol | |
ID | 5736781 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 6271371 |
End bp | 6273056 |
Gene Length | 1686 bp |
Protein Length | 561 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641282112 |
Product | ABC transporter related |
Protein accession | YP_001547703 |
Protein GI | 159901456 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTATCG CTAGCGCTCA GGATGTTCAC TACAGCATTG GTGGTCGAAG TATTCTCAAC GGCCTAAATT GGGAAATTCA CGAACACGCC CGCATCGGCT TGGTTGGCTC GAATGGTGCA GGCAAATCGA CGTTGCTGCG CTTATTGGCA GGCTTTGAAA CGCCGACGGC TGGCCACATT AGCACACGGC GCGGATTACG CATTGCCTAC CTTTCGCAGC ATATCGTGGG CGATCAGCGC ACACCGTTGC AAACCGTCAT GGCCGCCCGC CCTGATTTGA CTGAGCTTGA AGCCCAAATT CAGGCCTGCG AAAACCAACT AGGCGAGCCA GTGATCGCCA ACGATCTTCA GCGGATGAAT CAGGTTTTAG AGCGTCACAG TCGCCTATTG AACCAATTCG AGGAGCTGGG TGGCTCAATG CTCTATAACG ATGCTCGTGG CTATTTACAG CAATTTGGCT TCGATGGCAA CGATCTGAAT TTGCCAACCA ACTCGCTCAG CGGCGGCCAA CGCAAAATGA TCGGCTTGGC TAGCTGTTTG ATTCAACGCC CTGATTTATT GCTGCTCGAC GAGCCAGAGA CCCACCTCGA TTTGAACCGC CGCGAGTTTT TAGAGACGAC AATTCGTGAG TTTGCTGGGG CGGTGGTGAT TGTCGCCCAC GATCGCTATT TGCTCGATGA AACCATCACC AGCGTTGTGC ATTTGGAAGC TGGCAAAACT AGCCTCTGGC TTGGCAATTA TTCGACCTAC GCCGTCAATC GCCAATTGGC TTTGCAACGC CAGCAGCAAG ATTTTATGGC GCAACAAAAG GAAATTAATC GCTTAGAAGA AGCAATTAAG CGCTTTCAAT TGTGGGCATC GTTAGTTCCC AACGAGCGCC ATATCAAGCA GGCGCGGGTC AAGCAAATGC AGATTGATAA GATGGATAAA GTTGAAAAGC CCGTGTTGGA GCGGCGCAAA GTCGGCTTGA GCCTACGCTC CGAGCAACGT GGCGGCCAAA AAATCATCGA TCTACGTGAT GTCAGTATGA GCTTTGGCGA CGATTTAGTG CTTCTGGGAA TTGAACAAAC CATCTGGCGC GGCGAACGGG TTGGGATCGT CGGCCAAAAT GGCGCGGGCA AAAGTCTGCT TGGTAAGTTG ATGCATGGGC AATTTGAGCC AAGCGATGGC ATGGTTTGGG TTGGCCCATC GATCGAAATT GGCTATTTTG CCCAAGGCGT TGAGACGCTT GATCATAGCC AAACGCCGAT TGATGTAGTA CGCCTCACGC GTTCGATGTA CGAGGGCCAA GCGGTGGCAT TTTTAGGTGG ATTTTTGTTT AGTTATGCTC AATGTCGCCA AAGCATCGGC TCGCTTTCTG GTGGCGAACG GGCACGCTTG CAATTAGCAT TGTTGATGTT AGCCAAACCC AATTGTCTAA TTCTTGATGA GCCGACCAAC CATTTAGATA TTGATTCGGT CGAAGTCTTG GAAGATGCCC TAGAACGCTA CGACGGCACA GTGATTGTGA TTTCGCACGA CCGCTACTTT CTTGATCGCG TGGTTGATCG AGTTTGGGCT GTCAATGATG GTAGCATCAA AGCTCACCTT GGCGGCTACA GTGCTTGGCG TGAAGCTAGT AAAGCCCCGC CAGCGCCCAT TATCGAGCCG GTAGTGGTTA AGACTAAGGC CAAAGTTAAA CGATAG
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Protein sequence | MIIASAQDVH YSIGGRSILN GLNWEIHEHA RIGLVGSNGA GKSTLLRLLA GFETPTAGHI STRRGLRIAY LSQHIVGDQR TPLQTVMAAR PDLTELEAQI QACENQLGEP VIANDLQRMN QVLERHSRLL NQFEELGGSM LYNDARGYLQ QFGFDGNDLN LPTNSLSGGQ RKMIGLASCL IQRPDLLLLD EPETHLDLNR REFLETTIRE FAGAVVIVAH DRYLLDETIT SVVHLEAGKT SLWLGNYSTY AVNRQLALQR QQQDFMAQQK EINRLEEAIK RFQLWASLVP NERHIKQARV KQMQIDKMDK VEKPVLERRK VGLSLRSEQR GGQKIIDLRD VSMSFGDDLV LLGIEQTIWR GERVGIVGQN GAGKSLLGKL MHGQFEPSDG MVWVGPSIEI GYFAQGVETL DHSQTPIDVV RLTRSMYEGQ AVAFLGGFLF SYAQCRQSIG SLSGGERARL QLALLMLAKP NCLILDEPTN HLDIDSVEVL EDALERYDGT VIVISHDRYF LDRVVDRVWA VNDGSIKAHL GGYSAWREAS KAPPAPIIEP VVVKTKAKVK R
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