Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_4939 |
Symbol | |
ID | 5736775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 6267325 |
End bp | 6267960 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641282106 |
Product | ribosomal protein S4 |
Protein accession | YP_001547697 |
Protein GI | 159901450 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0522] Ribosomal protein S4 and related proteins |
TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00864494 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCGAT ATACTGGTCC AGTATGTAAA TTGTCACGCC GCGAAGGCGT TGACCTAATG CTCAAGAGCG GTAACAGTGG CCGCAAGGTG CTTGAGCGCC GTGGGAGCCA GCCCCCTGGC CAACATGGGG CTTCAGTCCG ACGACGACAA TTGTCTGATT ATGGTGTTCA GTTGCGCGAG AAGCAAAAAG TTCGCCGGAT CTATGGTGTT TTGGAACGCC AGTTCCGCCG CTATTATGGC ATTGCGACCC GTACCACCGG CCAAACCGGT GCTGTGCTCT TGCAAATCTT GGAACGTCGC CTCGATAATG TGGTGTTCCG CTTAGGCTAT GCAGTAACTC GCGCCCAAGC TCGCCAGTTG GTCAACCACG GTCATATTAC CGTGAATGGC CGCAAAACCG ATATTCCTTC AGCCTTGGTT GAAGTTGGCG ATGTAATTGG CGTGCGGGCC GAAAGCCGCA AACGCGATTA TTTCAAAGAT CTCGAAGAAA CCAAACAACT CAATCGCGTG TCACCACCTA GCTGGTTGTC ACTTGACGCT GGCAAGATGG AAGGGGTTGT GCAAACCTTC CCATCACGCG AAGAGTTGGA TATGTCGATT AACGAGCAGT TGATTGTTGA ATTCTACAGC CGCTAA
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Protein sequence | MARYTGPVCK LSRREGVDLM LKSGNSGRKV LERRGSQPPG QHGASVRRRQ LSDYGVQLRE KQKVRRIYGV LERQFRRYYG IATRTTGQTG AVLLQILERR LDNVVFRLGY AVTRAQARQL VNHGHITVNG RKTDIPSALV EVGDVIGVRA ESRKRDYFKD LEETKQLNRV SPPSWLSLDA GKMEGVVQTF PSREELDMSI NEQLIVEFYS R
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