Gene Haur_4439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_4439 
Symbol 
ID5736290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand- 
Start bp5679707 
End bp5680780 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content56% 
IMG OID641281602 
Product3-isopropylmalate dehydrogenase 
Protein accessionYP_001547199 
Protein GI159900952 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0473] Isocitrate/isopropylmalate dehydrogenase 
TIGRFAM ID[TIGR00169] 3-isopropylmalate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGCAA CAATTGCTTT ATTACCAGGC GATGGCATCG GCCCCGAAGT TGTCGCTGAG 
GGGGTTGAGG TGCTCAAGGC CGTCGGTGAA CGCTACGGCC ATAGTTTTAG TTTCAGCGAA 
GGCTTAATCG GTGGTTGTGC AATCGATGCC CACGGCACAG CGTTGCCCGA AGCCACAATC 
GAAATCTGCC GAGCCGCCGA TGCCGTGCTG CTGGGCGCGG TTGGCGGCCC CAAGTGGGAT 
GATCCCAAGG CCAAAGTTCG ACCAGAACAA GGCTTGTTGG GCATTCGCAA AACCTTGGGC 
TTGTATGCCA ATTTGCGGCC TGTGACCGTC ACGCCCGCCT TAGCTAGCCG CTCACCATTG 
CGCCCCGATT TGGTCGAAGG GGTCGATTTG TTGGTAGTGC GCGAATTAAC TGGCGGGATT 
TACTTCGGCG ATAAAACCTG TGTCTACATT CGCCCCGACG AAGAACAAGC TGTCGATACC 
TGTGTCTATA CCACCAGCGA AATCGAGCGC GTGGTGCGGC GGGCTTGTGA ATTGGCACGG 
ACTCGCCGTG GCAAAGTTAC CTCGGTCGAT AAAGCCAATG TCTTGGAAAC CTCACGCTTA 
TGGCGGCGCG TCGCCAGCCG AGTGGTTGCC GAAGAATTCC CTGATATTCA GCTTGAGCAT 
ATTTTGGTCG ATGCCTGTGC GATGCACTTG TTGCGCCGCC CTGCCGACTT CGATGTGATT 
GTGACTGAAA ATATGTTTGG CGATATTCTG ACCGACGAAG CGTCGATGTT GGCTGGCTCG 
TTGGGCTTGT TGCCATCGGC CTCGCTTGGT GCGGGCAAAG CTGGTTTGTA CGAGCCAATT 
CACGGCAGCG CTCCCGATAT TGCTGGCAAA GGCGTGGCCA ATCCACTGGC GACAATTTTG 
AGCGTAGCCT TGCTGTTGCG CTATTCCTTG GGCTTAGATA CCGAGGCTGA GGCAGTCGAA 
AAAGCCGTAT ATGCAACGAT CGATGCAGGC ATTTTAACTG GCGATTTAGC GCCTGCAGGC 
CAAGGCCGCT CAACCAAAGA AGTTGGGGCA GCGGTGTTGG AACGTTTGGG CTAA
 
Protein sequence
MQATIALLPG DGIGPEVVAE GVEVLKAVGE RYGHSFSFSE GLIGGCAIDA HGTALPEATI 
EICRAADAVL LGAVGGPKWD DPKAKVRPEQ GLLGIRKTLG LYANLRPVTV TPALASRSPL 
RPDLVEGVDL LVVRELTGGI YFGDKTCVYI RPDEEQAVDT CVYTTSEIER VVRRACELAR 
TRRGKVTSVD KANVLETSRL WRRVASRVVA EEFPDIQLEH ILVDACAMHL LRRPADFDVI 
VTENMFGDIL TDEASMLAGS LGLLPSASLG AGKAGLYEPI HGSAPDIAGK GVANPLATIL 
SVALLLRYSL GLDTEAEAVE KAVYATIDAG ILTGDLAPAG QGRSTKEVGA AVLERLG