Gene Haur_4260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_4260 
Symbol 
ID5736114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp5435581 
End bp5436552 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content51% 
IMG OID641281415 
ProductDNA polymerase III, delta subunit 
Protein accessionYP_001547020 
Protein GI159900773 
COG category[L] Replication, recombination and repair 
COG ID[COG1466] DNA polymerase III, delta subunit 
TIGRFAM ID[TIGR01128] DNA polymerase III, delta subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGTATC TCTTTTTTGG CCCCGACGAT TATACCCGCC AAGCCACGAT CAACGTGCTC 
AAGGCGGCTT TTCCACCTGA TGCCGCTGCT TTCAATGTGG TGGTGCTCCA CGGCAAATCG
ATCAAACTCA ACGAAGTGCG CACTGCTTGC GAAGCGTATC CTGTTTTTCA TGATCGCCGC
TTGGTGATTG TGCATGATCT GTTAAAGCAT GCCAAATCGG CTGAAATGCG CGATGGCCTC
AAAAGCTTGG TTCAGCGCTT GCCCTCAACC ACCGACCTTG TGCTCAACGA AAGTGATGCC
CCTGATAGCC GTTTGAGTGT GGTCAAAGAT ATTCAGGCTT TGGTTAAAAC TAAACAAGCT
GAGCAGCGCG AATTTAATTT GCGTGAAGGC AATGCCCTCA TCGCTTGGAT GCAGCAAGAA
GCCCAATCCA ACGGCGTGCA ATTACGCCCT GATGCCGCTC AACATTTGGC CAATTATGTG
GGCAGCGATG GTTGGATGCT GCATAACGAA ATTGCCAAAT TAGCCGCCTA TGTGGGCCAA
AATGGCACAA TCAGCATGCG CGAGGTCGAT TTGCTGGTGG CTGATGAGAC AGAAACCAAC
TTATTTAATT TTATCGACGC ATTAAGTACT CGGCGCGGTG CGGCGGCGGT GCAAGGCTTA
AATGGCTTAT TAGCCGATGA TGCCGCGCCG TTGTATATTT TGACCATGAT TGCCCGCCAA
GCGCGTTTGA TGTTGGCGGC GCAGAGTGCT GGACGCGTTG CACCTGATGA ATTAGCCAAA
CTTTTGGGTC AAAAACCGTT TGTAGCCCGC AAAGCAGCTG AGCAAGCCCG CAATTTCAGC
CCAACTGAGC TGCGCATGCT CCACGAACGG GTGGTGCAGA TTGACCACGG GATTAAAACA
GGTAAAATCG ACGCAGAAGG CGCACTAGCC AGTCTCGTTG GCGATTTTGG CTTTGCGCCA
AACCGAAAAT AA
 
Protein sequence
MLYLFFGPDD YTRQATINVL KAAFPPDAAA FNVVVLHGKS IKLNEVRTAC EAYPVFHDRR 
LVIVHDLLKH AKSAEMRDGL KSLVQRLPST TDLVLNESDA PDSRLSVVKD IQALVKTKQA
EQREFNLREG NALIAWMQQE AQSNGVQLRP DAAQHLANYV GSDGWMLHNE IAKLAAYVGQ
NGTISMREVD LLVADETETN LFNFIDALST RRGAAAVQGL NGLLADDAAP LYILTMIARQ
ARLMLAAQSA GRVAPDELAK LLGQKPFVAR KAAEQARNFS PTELRMLHER VVQIDHGIKT
GKIDAEGALA SLVGDFGFAP NRK