| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4084 |
|---|
| Symbol | |
|---|
| ID | 5735943 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 5217358 |
|---|
| End bp | 5218746 |
|---|
| Gene Length | 1389 bp |
|---|
| Protein Length | 462 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641281236 |
|---|
| Product | TPR repeat-containing protein |
|---|
| Protein accession | YP_001546844 |
|---|
| Protein GI | 159900597 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.806562 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTCGAG TGAAGATTTT ACTACTTGCA ATTATTTTTC TGCCAATTCA ATCAATCAAT
CAGGTAAACG CCCAAAAAAT AGCTGAAATT TCACGAAATA CCACAAATGA GCAACTTGAT
AGTGATAGCG ATAGTTTGAC CAATAGCTGG GAAACCAACC ATCAACTTAA TCCCTATAGC
GCACTTGGCG ACGATGGCGC GGCGGGCGAC CCTGATCACG ATGGCTTGAG TAATGCCAAT
GAGCAAATTC ACGCGACCAA TCCGCGTAAC CCTGATAGCG ATGCTGATGG GCTGAATGAT
GGCTGGGAAG TGCGCTATTG GCTGAATCCA ACCAGCGCAA TCGGCGATCA TGGAGCCACT
GGCGATGCTG ATCGCGATGG CTTGACCAAT CAAGAGGAAT TATTTAGTAA TACTTACCCG
AACAATCCTG ATACAGATGG CGATGGGTTA CGTGATGGCT GGGAAGTTGA TCATCAATTT
TCGCCGATTA ATACCACTGG TTATCACGGC AGCGCAGGCG ATGTTGATAC TGATAATCTG
AATAATTTTC AAGAGCAAGC AGCAGATACT AACCCCCGTC ACCCCGATAG CGATGGCGAT
GGCTTGCCCG ATGGCTTGGA AATTGAGCAT GGTTCGAATC CCTTAGATTG TGATTTGGAT
GCTGACGCAG ATGGTTTGGA GAATCAGCCA GAACTGGCTT TGGCAACCAA TCCATTTAAT
TCTGATAGTG ATGGTGATGG TTTGCCCGAT GGCTGGGAAG TGGCGCAGCA GCTCAATCCC
TTGAGTGTTG CTGGCATTCA TGGAGCCAAT GGCGATGGCG ATGCAGATGG TTTGGGCCAA
TTGCAAGAAT ATCTGCATCA AACCAACCCA CATCAGGCCG ATAGTGATGA CGATGGCTTA
CTCGATGGTT GGGAAGTGCA GCATCATTTG AACCCGCTCA GTAGTTTGGC CGCTGATGGA
GCCAACGCCG ACCCCGATAG CGATTCGCTG AGTAACCTTG CCGAACAAGG CTTTGCCACC
AACCCACGCA ACGCCGATAG TGATAATGAT CAATTGCCCG ATGCTTGGGA ATTGCAACAG
CAACTTGATC CGTTGCTGGC AAGTGGCGAA GTTGGCACAC ATGGCGATCC TGATGCTGAT
CGATTAACCA ATCTAGCTGA ATATCGCAAT AGCACCCGAC CGTTGCTGGC GGATAGCGAC
GGCGATGGCT TAGACGATGG TTGGGAAGTG CAGTATACGC TTGATCCACT TGATGGATTT
GGGGTAAACG GAGCCAATGG CGACCCTGAT AGCGATGGCA TGAATAATTT GATTGAATTG
CAACGCCAAA CCCACCCGTT GCAGGCCACG TACCTCGTTA TGCTGCCACT CGCTCAACAT
TCCTACTAA
|
|---|
| Protein sequence | MLRVKILLLA IIFLPIQSIN QVNAQKIAEI SRNTTNEQLD SDSDSLTNSW ETNHQLNPYS
ALGDDGAAGD PDHDGLSNAN EQIHATNPRN PDSDADGLND GWEVRYWLNP TSAIGDHGAT
GDADRDGLTN QEELFSNTYP NNPDTDGDGL RDGWEVDHQF SPINTTGYHG SAGDVDTDNL
NNFQEQAADT NPRHPDSDGD GLPDGLEIEH GSNPLDCDLD ADADGLENQP ELALATNPFN
SDSDGDGLPD GWEVAQQLNP LSVAGIHGAN GDGDADGLGQ LQEYLHQTNP HQADSDDDGL
LDGWEVQHHL NPLSSLAADG ANADPDSDSL SNLAEQGFAT NPRNADSDND QLPDAWELQQ
QLDPLLASGE VGTHGDPDAD RLTNLAEYRN STRPLLADSD GDGLDDGWEV QYTLDPLDGF
GVNGANGDPD SDGMNNLIEL QRQTHPLQAT YLVMLPLAQH SY
|
|---|
| |