| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3892 |
|---|
| Symbol | |
|---|
| ID | 5735753 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 4884400 |
|---|
| End bp | 4885563 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641281043 |
|---|
| Product | Alpha-galactosidase |
|---|
| Protein accession | YP_001546654 |
|---|
| Protein GI | 159900407 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3345] Alpha-galactosidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.77449 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGACTT CAGAACAGCC TCTCGCACCT ACGCCCCCAA TGGGTTGGAA CTCGTGGAAC
ATGTTTGGTA GTACGATTCA TGAAGATTCA GTCCGTGCCA CTGCTGACGT GTTGGTTAGC
TCAGGCCTCA AGGATTGTGG TTATAACTAT GTGGTGATTG ATGATTGCTG GTCAACCAAA
GTTGGCCGCG ATGGCAACGG CGATTTGGTT GCCGACCCCG AAAAATTCCC CAGTGGCATC
AAAGCGCTAG CCGATTATGT GCATAGCCTT GGTTTGAAAA TTGGCATCTA CTCCGATGCG
GCGCATCTGA CTTGCGCTAG TTATCCTGGC AGCTTTGGCT TCGAGGAGCA AGATGCCCAA
TTATGGGCTT CGTGGGGCAT CGATTTCCTC AAATATGATT TTTGTTTTGC GCCAACCGAC
CAAGCCACTG CGATCGACCG TTACACCCGC ATGGGCGAGG CGTTGCGCAA AACGAAGCGC
CAATTTCTCT ACTCGTTGTG TGAGTGGGGT GGCCGCAGCC CACAGCTCTG GGGTCGCTCG
GTTGGCGGGC ATATGTGGCG GGTCACTGGC GATATTTTCG ATAGCTGGGT TGATATTTGG
GTTGCGCCAC ACAAATATTA TGGGGTAGGC ATTGATACAG CGATTGATAT TGCCGCCAAT
TTAGCCGAAT ACGCTGGCCC TGATGCCTGG AACGATTTGG ATATGCTGGT GGTTGGATTG
AAGGGCAAGG GTCAAATCTC TGGCGGTGGC TTATCATTCA TCGAATATCA AACCCATATG
TCGTTGTGGA CGATCGCCTG CTCGCCCTTG ATGATCGGCT GCGATATTCG CAATATGGAT
CGCGATACCA CCAGTTTATT GACTAATCGC GAAGTTTTGG CCGTCAACCA AGATAGTTTG
GGGATTGCTG GGCGGCGCGT GAAACAAACC GGCACGTGCG AAATTTGGAA AAAACCGCTC
GCCGATGGCT CGTTGGCGGT TGCCTTGATT AATCGTGGCT CGATCGGCAG CGATTTAAGC
TTGCGAGCCA GCGATATTGG CCTGCTCGAT ACGCCGAAAT CAGTACGAAA TTTGTGGGCG
CAAGCAGATA TTGCCGAGTT TGGCGAGGCT TGGCAAACCC GCATTCAACC CCATGAAACA
TTATTGCTCA AAATCAAAGC CTAA
|
|---|
| Protein sequence | MTTSEQPLAP TPPMGWNSWN MFGSTIHEDS VRATADVLVS SGLKDCGYNY VVIDDCWSTK
VGRDGNGDLV ADPEKFPSGI KALADYVHSL GLKIGIYSDA AHLTCASYPG SFGFEEQDAQ
LWASWGIDFL KYDFCFAPTD QATAIDRYTR MGEALRKTKR QFLYSLCEWG GRSPQLWGRS
VGGHMWRVTG DIFDSWVDIW VAPHKYYGVG IDTAIDIAAN LAEYAGPDAW NDLDMLVVGL
KGKGQISGGG LSFIEYQTHM SLWTIACSPL MIGCDIRNMD RDTTSLLTNR EVLAVNQDSL
GIAGRRVKQT GTCEIWKKPL ADGSLAVALI NRGSIGSDLS LRASDIGLLD TPKSVRNLWA
QADIAEFGEA WQTRIQPHET LLLKIKA
|
|---|
| |