| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3843 |
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| Symbol | |
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| ID | 5735708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 4825494 |
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| End bp | 4827128 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641280996 |
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| Product | spermidine synthase-like protein |
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| Protein accession | YP_001546607 |
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| Protein GI | 159900360 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4262] Predicted spermidine synthase with an N-terminal membrane domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGTTAG TCTTTGGTGC GGGGATCTGT ACGCTCGGCA TCGAAATGAC TGCTTCGCGG
CTTTTGGCTC CTTACTTCGG TACATCGCAG TTGATTTGGG CCAACGTCAT TGGTTTAACT
TTGCTCTATT TGACGATTGG CTATACCCTC GGCGGGCGTT GGGCCGACCG TCGGCCTGAA
TTGGGCTTGC TTTGTACGAT CATTTTGGTC GGGGCAATCA CTGCTGCTGT GATCCCTTGG
ATCTCACGGC CAATTTTGAA GTGGTCGCTT GAGGCCTTTG CCACTCGTTC AGCGGGCTCG
TTTATTGGCT CGTTGCTGGG GGTTTTGGCC TTGTTCTCAG TGCCAATCAC CTTGTTGGGC
ATGGTTAGCC CCTTCGCAGT ACGCCTCGCG ATTCGCGATG CTGCCGATGC GGGCAAGGCG
GCGGGCAACC TCTCGGCAAT TTCGACGCTT GGCTCGATTC TCGGTACGTT CTTGCCGGTG
CTCTTCCTCA TTCCCACGGT TGGCACAAAT ATGACAATTT ATATTTTTGC CATGGGCTTG
TTGGTGTTAA TTTTGCCTGG CTTCTGGTTG GAGCGGCGCA AGTTGCTGCC AGTCGCTTTG
GTGGCCTTGA TCGTAGTGGT GGCATTGGCA TTTTGGCCGC AAAGCGAGCC AATCAAGGTC
GCCGATTGCC GTGGTTGTAG CCTGATTACT GAAGATGATT CGGCTTACAA CTATATTCAG
ATTGTCGAAC GGGGCAGCGA TGCCAACAAA ATGATCGGCT TGGTGCTCAA CGAAGGCCAA
GCCATCCACT CAATTTACTA CCCAAAATTC GAGCAAACTA ATAATGCTAG CGATTTGCTG
ACCAACGGGC CATGGGATTT TTATAATATT GCGCCTTACT TCTACCCCAA CCGTAGCATG
GAAAGCGTCA ACAGTATGGC CATGGTTGGC TCGGCGGCTG GCTCAGTGCC CAAACAATTT
TTAGCCATTT ATGGCAAAGA TTCAGTGATC GATGGAATTG AAATCGACCC ACGAATTGTT
GAACTAGGCC GTGAATACTT CGCGATGCAC GACGTGCAAT ATTATCAAGC ACGCGGCGAA
ACTCCCCAGT TTCCTAATTT CAATACTTAT GTTGCTGATG GCCGAATTTT CTTCGCTGGC
AACGACAATA AATATGATAT TATCGGCATG GATGCCTACA AACAGCCCTA TATTCCGTTT
CACCTCACCA CCCGTGAGTT TTTTGAAACG GTACGCGACC ATTTAGCTCC CAACGGAGTT
GCTGTGGTTA ATGCAGGCAA GCCCAACACC GCTGCTGGCG GCGATTATCG CTTGGTCAAT
GTGTTGGCCA GCACCATGAG CAGCGTGTTT GCCCATGTCT ATATGATCGA TGTGCCGAAT
AATTTTAATA CAATGTTGAT TGGCATTCCT GGCGATGTTG GCGATGGCGT TGCTAACTTT
GAAGCCAATC TCGCAACCAT TCAAGACCCG ACTCTGCGCT ATGTGATGGA GCAAGCACTA
GCCAGCAATA GCAGCAAAAA ACCAATTCGC CGTTGGGATG GCGTAGGCGA AAATCGGGTC
TTTACCGACG ACCTCGCCCC AGTTGAATCG GTGATCGACC GAATTATTTT GGGGCAGGTT
GATGAAGGCC AATAG
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| Protein sequence | MLLVFGAGIC TLGIEMTASR LLAPYFGTSQ LIWANVIGLT LLYLTIGYTL GGRWADRRPE
LGLLCTIILV GAITAAVIPW ISRPILKWSL EAFATRSAGS FIGSLLGVLA LFSVPITLLG
MVSPFAVRLA IRDAADAGKA AGNLSAISTL GSILGTFLPV LFLIPTVGTN MTIYIFAMGL
LVLILPGFWL ERRKLLPVAL VALIVVVALA FWPQSEPIKV ADCRGCSLIT EDDSAYNYIQ
IVERGSDANK MIGLVLNEGQ AIHSIYYPKF EQTNNASDLL TNGPWDFYNI APYFYPNRSM
ESVNSMAMVG SAAGSVPKQF LAIYGKDSVI DGIEIDPRIV ELGREYFAMH DVQYYQARGE
TPQFPNFNTY VADGRIFFAG NDNKYDIIGM DAYKQPYIPF HLTTREFFET VRDHLAPNGV
AVVNAGKPNT AAGGDYRLVN VLASTMSSVF AHVYMIDVPN NFNTMLIGIP GDVGDGVANF
EANLATIQDP TLRYVMEQAL ASNSSKKPIR RWDGVGENRV FTDDLAPVES VIDRIILGQV
DEGQ
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