| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3827 |
|---|
| Symbol | |
|---|
| ID | 5735691 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 4805299 |
|---|
| End bp | 4806615 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641280979 |
|---|
| Product | UDP-glucose/GDP-mannose dehydrogenase |
|---|
| Protein accession | YP_001546591 |
|---|
| Protein GI | 159900344 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0677] UDP-N-acetyl-D-mannosaminuronate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.10325 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGTACCT TTGCAGATTT ACGCAGCGCG ATCGAAACAC GACGTGCGCA AGTTGGGGTT
ATTGGCATGG GCTATGTTGG CTTGCCAATG TTGGCTCGGG CTGGCAACGT TGGATTCAAT
GTGCTAGGCT TCGATATTAG TGCTGAACGA ATTGCCAGCA TCAACGAGGG CGTGAGCTAT
ATCGGCGATG TGCCAAGCAG CGATTTGGCC GCGCTCCGCA ATAATAAGTT GATCGAAGCA
ACCGCCCAAT TTGAGCGATT GCGCGATTGC GACATTATTA TTATTTGTAT GCCGACCCCA
CTCAACGAAG CTCGCGACCC CGATATGAGC TATATCGAAT CGGCGACCAA CGAGATTGCC
GCGCGACTCC GCCCAGGCCA ATTGATTATT CTTGAAAGCA CCACCTACCC CGGCACCACG
GTTGAAGTGC TCAAACCAGC CTTTGATGCT TGCAATCTCA GCGTGGGCGC AGATTATTTC
TTGGCCTTTT CGCCCGAGCG GATCGATCCT GGCTCGGTTA ATTTCAAGGT GCACAATATT
CCCAAGGTGG TTGGTGGAGT TACGCCGCAG TGCAACGAGC TAACCTCGTT GTTCTACGGC
CATATCGTAA CTGCGGTAAC CGAAGTTTCA TCGCCAGCCG CCGCCGAAAT GACCAAATTG
TTCGAGAATA TTTTCCGCAA CGTCAATATT GCCTTGGTCA ACGAATTAAC TCTAATCTGC
GATCGCATGG GCTTGAATGT TTGGGAAATT ATCGATGCTG CCGCAACCAA GCCATTTGGG
TTTATGCGCT TTACCCCAGG CCCAGGTTTG GGCGGCCACT GTATCCCGCT TGATCCCTTC
TATTTGGCTT GGAAGGCGCG GCATTACGAT ATTTCGGCGC GTTTTATCGA GCTAGCAGGC
GAGATCAATT TGACCATGCC GCGCTTTGTG CGCGATCGCA TCAGCCATGC GCTGAATGAT
CAAGAACGTA GCATCAAAGG CTCAACGGTT GTACTGCTCG GGGTGGCCTA CAAAAAAGAC
ATCGACGACT ACCGCGAATC GCCAATTTTC AAAGTAATGG ATTTGTTGGC GGCTGATGGG
GCCAATGTGT ACTGTTGCGA TCCCCATGTA ACCGTCTTTT ATGATCACCA TAATCATGAA
TACCAAACCG TGCCACTGAC TGATGAACTA CTACAGCAAG CCCATTGTAC GGTAATTGTG
ACCGATCACA GTGCCTTCGA TTATGCCAAG ATCGTCGAGC AAAGTCGCGT GGTTGTGGAT
ACCCGCAACG CCACCCGCGA GGTCAAAAGC CACCGCGAAA AAATTCGTTT GTTGTAA
|
|---|
| Protein sequence | MSTFADLRSA IETRRAQVGV IGMGYVGLPM LARAGNVGFN VLGFDISAER IASINEGVSY
IGDVPSSDLA ALRNNKLIEA TAQFERLRDC DIIIICMPTP LNEARDPDMS YIESATNEIA
ARLRPGQLII LESTTYPGTT VEVLKPAFDA CNLSVGADYF LAFSPERIDP GSVNFKVHNI
PKVVGGVTPQ CNELTSLFYG HIVTAVTEVS SPAAAEMTKL FENIFRNVNI ALVNELTLIC
DRMGLNVWEI IDAAATKPFG FMRFTPGPGL GGHCIPLDPF YLAWKARHYD ISARFIELAG
EINLTMPRFV RDRISHALND QERSIKGSTV VLLGVAYKKD IDDYRESPIF KVMDLLAADG
ANVYCCDPHV TVFYDHHNHE YQTVPLTDEL LQQAHCTVIV TDHSAFDYAK IVEQSRVVVD
TRNATREVKS HREKIRLL
|
|---|
| |