| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3533 |
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| Symbol | |
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| ID | 5735392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 4447760 |
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| End bp | 4449139 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641280680 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_001546297 |
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| Protein GI | 159900050 |
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| COG category | [K] Transcription |
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| COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.412037 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTGAAC AGTTACTTGA AAACGGCGAA AGCGAAATGC TGGCCTGCTT CCGTGAACGG
TTTCGGCCTG AAGATTTGGC TGAAACTTTA GTGGCTTTTG CCAATGGTGG CGGCGGCAGC
GTAGTCATTG GCATCAGTGG GCGAGTCAGG CCCAAAGTCG AGGGTGTTCA AGATATTCAA
GCAGCAGAAG AGGCAGCGTT AGAGGCAGCG CTAGCTTGCA CGCCGCCGCT GGTCTTGCCC
TTGCCCCAAC AAATTACCAG CAATCAACAA ACCGTCTTGT TGATCGAGGT TCCGCCTGGT
TTGCCGAATG TCTACAGTTT ACATGGCAAA TATTTGCGCC GCGAAGGCCC GAGCAATGCG
CCAATTCCGC CCAATGCGTT GCGCCAATTG CTGATCGAGC GTGGCGAGGT TGGCTGGGAG
CGCGTGCGGC CCGAAAACGT CACAATGGGC GATTTGAGCG AGATGAAAAT TCAATCGTAT
GTGGCCCGCA TTGGTCCGCC CGCCGATGTT GACCCCATGG GTTGGCTCTA TCGGCGCGGC
TGCCTCGTTC GCGATGCCCA AACCAACTAT CAACCAACCA ATGCTGGCAT GTTGCTGTTC
AGCATCACCA CCGAGCGCGA TTATCCCCAA TGCGAGCTGA CTTTGGTGCG CTACACGGGC
AACGAGATGA GCGATGAATT CGAGCGGGTC GATATTCGCA CAACCTTGCC CGACCAAGTA
CGCCGCGCCG AGCTTTGGTT GGGCGAACAT ATGCGGCGCG GCTCACGCAT GGTTGGCCTC
GAACGCGAAG ATTGGACGGA ATATCCGCCA GCCGCGGTGC GCGAAGCCTT GGTTAATGCT
GTGGCCCACC GCGATTATAC CGTGCGTGGC GAGGGTATTC GCATTGCCAT GTTTGTTGAT
CGACTAGAAG TCTATAGTCC AGGTCGCTTG CCAGGCCACG TCACGATCGA TAATATCGCT
GCTGAGCGGT TTAGCCGCAA CGAAACATTG GTGCAAGTGT TGGCCGATTT GGGCTTGATC
GAACGGCTTG GCTATGGCAT CGACCGCATG CAGCGCCAAA TGGCCGACGC AGGCTTGCCA
CCACCCGAAT TTCGCGAAAC CGCTGCGGGA TTTTTGGTAA CCCTGCGCAA CAAAGGCATG
AACGTCGCCA GCAATTCCAC GATCGACACC GCCAAATGGG AAGCCTTAGG CTTGAACGAA
CGCCAAATCG GAGCTTTGGT CTATTTAACT GAAAATCGCC GCATTACCAA CCGCGATCTG
CAAGACCTCA GCCCCGATGT TTCGCCCGAA ACAATTCGGC GCGATCTCTC GGATTTGGTC
GATCGGGGCT TGATTTTGAA GATCGGCCAA AAACGTGCAA CCTATTATAT TTTGCGCTAG
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| Protein sequence | MLEQLLENGE SEMLACFRER FRPEDLAETL VAFANGGGGS VVIGISGRVR PKVEGVQDIQ
AAEEAALEAA LACTPPLVLP LPQQITSNQQ TVLLIEVPPG LPNVYSLHGK YLRREGPSNA
PIPPNALRQL LIERGEVGWE RVRPENVTMG DLSEMKIQSY VARIGPPADV DPMGWLYRRG
CLVRDAQTNY QPTNAGMLLF SITTERDYPQ CELTLVRYTG NEMSDEFERV DIRTTLPDQV
RRAELWLGEH MRRGSRMVGL EREDWTEYPP AAVREALVNA VAHRDYTVRG EGIRIAMFVD
RLEVYSPGRL PGHVTIDNIA AERFSRNETL VQVLADLGLI ERLGYGIDRM QRQMADAGLP
PPEFRETAAG FLVTLRNKGM NVASNSTIDT AKWEALGLNE RQIGALVYLT ENRRITNRDL
QDLSPDVSPE TIRRDLSDLV DRGLILKIGQ KRATYYILR
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