| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3496 |
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| Symbol | |
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| ID | 5735357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 4402834 |
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| End bp | 4404606 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641280643 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001546260 |
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| Protein GI | 159900013 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTGACC TTGGATTGAT GCTCATGAAA TTGCGTTTTA GCCTTGCGCT GTTGCTCTGT
TTTAGCTTGA TTGGTTGTAG TATTGAGGGT GGTGCACCAG CTGGTCAGCC CACTGTCCAA
GTGCCAACTC CCTTGCCAAC GACCAACCCT GCCACTTCCA ATCTTTGGAC GTTGGGCTTA
ACGGAGGAGC CAGTTGATCT GTATCCCTAC AGTTATGCCT TTCGTGGCGC AGCTCCATTG
ATTGAATTGC TTTACCCTGC GCCTTTGACG GTGGTTGCTG AAGCCTATAC CACAACTGGC
GTTTTGGAGC GCGTGCCATC ATTCGAAAAT GGTGATGTGC AATATATTAC AACCACGGTT
AATCTTGATG CGAATGGCGT AATTACCACC ACGCAAACCG AAACGATTAC CAGCGTGCGT
CAGTTGACCG TCACCTATCG CTGGAATAAA AATTTGCAAT GGGAAGATGG CCAACCATTA
ACCGCAGCTG ATTCAGTTTT TGCCTATAAT TTGTTGCGTG GTAGCGCCTC AACCGCCCAA
TTGGCAACCC AAAGCGACTT AACCGCCGAT TATGTGGCGA TTGATCAATA TACGACTCGT
GCTTATTTGC CGCCCGAACG CGACGACCCA AATTATTTGG TGACGGTCTG GACTCCATTG
CCAGCGCATT TGTTTGAAGG TCAGCCAAGT GCCAAAGAAG TTAGCGATCG TTTGGCCCAG
TCGCCAGTTG GCTATGGCCC GTATACGCTC AAAGCCTGGA CGGCAGGCAC GCAGTTGGAA
TTTGTGCGAC GCGAAGGTCA AACGGAACAA TTGCCTAGCA CGATTATTGC CCGTTTATAT
CCTGATATTG CCATGATGCG CGACGATGTG CTGAGCGGGC GGGTCGATGT GGCTTGGACA
GAAGGTTCGT TGGAGCAATT AGCGCTTGAT CTGAAAACTG ATGTGCAATC CAAAACCTTG
CAATTGCTCC AAGCTCCCAA CCCAATTTGG GAACATATCG ACATGAATTT GGCGGTTGTA
GCTTTGCAAG ATATTCGGAT GCGCCAAGCG ATTGCCCATG GTTTTGACCG TGAGGCGATT
AGCACAACCT TGTATGGCAC GCCCAAAGCA GTTTTGCATA GTTGGTTGGC GGCTGAATCA
TGGGCTTTTG ATCCAACAAC AGTGGTCAGT TATACCTTTG ATCCTGCGCT TTCACGCCAA
TTGCTTGATG AAATGAATTA TCGTGATACC AATGATGATG GTTTGCGCGA ACGCCCTGAT
GGTACGCCCT TCCAATTGAC ATTAACCACT TCGGCTCAAA CCCCGATTCG CCAACGCCTG
AGTGAGCAAT TTGTCAGCGA TATGCAGGCA ATCGGGATTG ATATTAAGGT TGAAGCCTTA
TCAACCACCG ATTTGTATAG CCAGCAAGGG CCATTATTTG GGCGACGCTT TGAATTGGCC
TTGTTTGGCT GGCTGCGCAG CGTTGATCCC GATGGCGCGG TGTTGTGGAG TTGTGCCGCG
ATTCCTAACC AAATTAACGG CTACTCCGGC GATAATTTTA CTGGTTGGTG TATGGATACC
GCCGATCGGG CGATTCGTAC CGCGACCAGT TCGCTTGATC CGGCGGTGCG TAAGGCTGCC
TATAGCGAAC AACAGCAAAT TTTCACCCGC GAATTGCCAG TCTTGCCCGT GATTACCCGC
CAAACCACGG TGTTGCTTGC GCCGAATGTG CGAGGTGTGC AACCGCAACC ATTGGCTCCA
ATTACTTGGA ATGTGGGTGC TTGGCAACGC TAG
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| Protein sequence | MLDLGLMLMK LRFSLALLLC FSLIGCSIEG GAPAGQPTVQ VPTPLPTTNP ATSNLWTLGL
TEEPVDLYPY SYAFRGAAPL IELLYPAPLT VVAEAYTTTG VLERVPSFEN GDVQYITTTV
NLDANGVITT TQTETITSVR QLTVTYRWNK NLQWEDGQPL TAADSVFAYN LLRGSASTAQ
LATQSDLTAD YVAIDQYTTR AYLPPERDDP NYLVTVWTPL PAHLFEGQPS AKEVSDRLAQ
SPVGYGPYTL KAWTAGTQLE FVRREGQTEQ LPSTIIARLY PDIAMMRDDV LSGRVDVAWT
EGSLEQLALD LKTDVQSKTL QLLQAPNPIW EHIDMNLAVV ALQDIRMRQA IAHGFDREAI
STTLYGTPKA VLHSWLAAES WAFDPTTVVS YTFDPALSRQ LLDEMNYRDT NDDGLRERPD
GTPFQLTLTT SAQTPIRQRL SEQFVSDMQA IGIDIKVEAL STTDLYSQQG PLFGRRFELA
LFGWLRSVDP DGAVLWSCAA IPNQINGYSG DNFTGWCMDT ADRAIRTATS SLDPAVRKAA
YSEQQQIFTR ELPVLPVITR QTTVLLAPNV RGVQPQPLAP ITWNVGAWQR
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