Gene Haur_3424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_3424 
Symbol 
ID5735285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp4313483 
End bp4314694 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content47% 
IMG OID641280571 
Producthypothetical protein 
Protein accessionYP_001546188 
Protein GI159899941 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000157289 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGTTC AGCCAACTAG TCCGATTCGT TTCTCACCTC GCGCAAAGTT TGTAACAGTC 
CTTTCGATTG TTATTATTAG CCTGTACTTG GTCAACCAAG CTTGGCATAT TATGATCCCC
TTTATTTGGG CGATCATCAC GGCCTATATT TTTAATCCAG TTGTTACCTG GATGCAACGG
CGTACCAAAA CCCCCCGCTT CTGGTGGGTG ATTGTGCTGT ATATCATTGG TTTTACGCTG
TTAACTTTGC TTGTGAGTAA CGTCGTGCCA CTGATTACCT CGCAGATTAA CGATTTGGCC
CAAACCATTC CTATATGGCT TGATGATGCT AAAATCTATG TTGAGCAGCA TCAAGCGTTG
ACCATTCGTG GGGTTGAAAT TGTTAATCTG CGTGAAGCTG AACGCGAAAT CTCGGGGGCA
ATTGCGGCGT TTGCCAAAGC CCTGCCTGGT ATCGCCCCGC TGTTTCTGTT TGGGCTAGCC
GAAGGCTTTA TTTTGCTTTT GGTTTATTTC GTCGTAACGT TTTATTTATT GCTCCAAGCC
GAAACCATCC CCAACAATTT CTATCGCTTA ATTCCCGAAC GCCATCGTGA TGAAATTCGT
CAATTGATTG GTTCGATCGA TCGGGTGCTC TCAGCCTACA TTCGCGGTCA GTTTTTGCTG
ATTATCATTA TGTCGGTGTT GAGTTACATT GCCCTATCAA TTTTGCAAGT CAAATATGCC
TTGATTATCG CCATCGCCAC CGGCTTCTTG GAAATTATCC CAATCATCGG GCCGTACATG
GCCACCGCCA TCGCCGCTTT GGTAGGCTTT TTCCAAGGCA CAACCCCATT TGGCTGGGAG
CCTTGGGTAT TAGCGTTGGT AATTATTGCC GTCTATTTTG CCCTGCGCCA ATTCGAAGAT
CACTTTATTA TTCCAAATTT GGTCGGACAT ATCGTCAATG TGCATCCGGT CTTTGTGATC
TTTGCAATTT TGGCGGGGGG AGCGGTAGCC GGCGGCTTAG GTTTACTCAT ATCGATCCCG
ATTGCCGCAG TTGCTCGCAT CATTCTTTCA TATCTGCATG GCAAGCTTGT CGATTCGCCC
AACCCGCAGG CCGATTTGGT CGAACAAGAG GGCAAATTGC TTGAAAACCA TATAGTGGCT
GAGCGTCGCG AAAGTCGGCG CAACCGCCGC GAAGCCAAAA AACAGGTCGA AGGCAGCGAT
CTCAAACCCT AA
 
Protein sequence
MHVQPTSPIR FSPRAKFVTV LSIVIISLYL VNQAWHIMIP FIWAIITAYI FNPVVTWMQR 
RTKTPRFWWV IVLYIIGFTL LTLLVSNVVP LITSQINDLA QTIPIWLDDA KIYVEQHQAL
TIRGVEIVNL REAEREISGA IAAFAKALPG IAPLFLFGLA EGFILLLVYF VVTFYLLLQA
ETIPNNFYRL IPERHRDEIR QLIGSIDRVL SAYIRGQFLL IIIMSVLSYI ALSILQVKYA
LIIAIATGFL EIIPIIGPYM ATAIAALVGF FQGTTPFGWE PWVLALVIIA VYFALRQFED
HFIIPNLVGH IVNVHPVFVI FAILAGGAVA GGLGLLISIP IAAVARIILS YLHGKLVDSP
NPQADLVEQE GKLLENHIVA ERRESRRNRR EAKKQVEGSD LKP