| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3345 |
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| Symbol | |
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| ID | 5735215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 4217602 |
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| End bp | 4219722 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641280492 |
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| Product | RNA-binding S1 domain-containing protein |
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| Protein accession | YP_001546109 |
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| Protein GI | 159899862 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTATG CCCATTTAAT TGCCAAAGGC TTGACGGTGC GTGCCGAGCA AGTTACCGCT
GCGATTCAAT TATTCGATGC AGGCAATACT TTGCCGTTCG TCGCTCGTTA TCGTAAAGAG
CAAACTGGTG GCTTGGATGA AGAACAATTA CGCAGCATTC AAAGCCAAAT TGCCCGTTTA
CGTGAGCTTG ACGAGCGGCG CGAGGCGATT TTGAGTGCTC TGCGCGAGCA AGGCAATTTG
AGTGATGAAT TGGCCCAAGC CTTGGCCGCC GCTACTGATA AAACCACCCT CGAAGATTTG
TATGCGCCGT TCAAGCCCAA ACGCCGTACC CGCGCCAGCA TAGCCCGCGA ACGTGGCCTC
GAAGGCTTGG CTGAAATTAT TCAAATGCAG CCGAATGATC CGATTGATGC TACCGCTCGC
CAGTTTCTCA ACGAACAGGT TGCCAGCATT GAAGAGGCCT TGGCTGGAGC ACGCGATATT
GTAGCCGAGC AAATCAGCGA TCATCCTGAG GTGCGCCGTC AAACTCGCGA ACGCGCTTTG
CGTTGGGGCG TGGTTCGCAG CGAGTTAATC GCCGATGCCG AGGATAGCAA GGGCGTATAT
CAAACCTACT ATCAATTTGA GAGCACGGCC AGCCGCCTCA AGCCTTACCA AGTGTTGGCG
CTCAACCGTG GTGAAACCGA ACATATTTTG CGTTTTAAAA TTCAGATGGA TCAACGTGAT
TGGTTTGATG TGGTTGCCAA GTATTTTCCG CTTGATCAAC GTTCAGCTTG GGCCGAGCAA
CTGCGCTTGG CGATCCACGA TGGCGCTGAG CGATTGCTCT TGCCAGCAAT TGAACGCGAT
GTGCGCCGCG CCTTGACTGA GCAAGCCGAA AGCCATGCGA TCACCGTCTT TGCCAAGAAT
GTGCATTCGT TGTTGCTGCA AGCGCCAATC GCCAATAATG TGGTGCTCGG GCTTGATCCA
GGCTACCGCA CTGGTTGCAA AGTGGCGATT ATCGGCCAAA CTGGCAATGT GCTCACGACT
GCCACGATTT ATCCTCACAG CGGCGCGGCA GCGCGTGAAC GGGCGTTTCA AGAATTGCAA
AGCTTGATCA AACGCTATGC TGTGAGTTTG ATTGCCATTG GCAATGGCAC GGCCTCGCGC
GAAACTGAGC AATTAGTCGC CGATGTGATT CGCCACCAAA CTGGTTTGCA CTATTTGATT
GTCAGCGAAG CAGGAGCCAG TGTTTACAGT GCTAGTACGC TTGCCCGCAG CGAATTGCCT
GATCTCGATG TCAGCTTGCG CGGCGCGGTT TCGATTGCAC GGCGGGTGCA AGATCCCTTG
GCCGAGTTGG TCAAAATCGA GCCAAAAGCG ATTGGCGTAG GCATGTATCA ACACGATGTT
GATCAATCGG CCTTGGGCAA TGCGCTTGAT GGCGTGGTTG AGAGCGCAGT TAATAATGTT
GGGGTTGATG TCAACACCGC TTCGCCTGCG CTTTTACGCT ATGTTGCCGG GATTGGCCCC
AAACTTTCGG CTCAAATTGT CAGCCATCGC GAGGAACATG GCCCATTTCG TTCGCGGGTT
GCACTCAAAA AGGTCAAAGG GCTTGGGCCA AAAGCCTTTG AACAGGCCGC CGGATTTTTG
CGAATTCGCG ATGGCGATGA AGCCTTGGAT GCCAGCGCAA TTCACCCCGA AAGTTATACG
GTTACCCGTA ATTTGTTGGA CAAGCTGAAT ATTAACGCCA AAACAGGCCG CAACGAACGA
ATCAAACGCT TGGAAGATTT GAAAAATCAG CCATTGCATA GCCTTGCGGC GGAATTGGGC
ACAGGCGTAC CAACCCTGAG TGATATTATT GACCAACTGC TGCGGCCAGG TCGCGACCCC
CGCGAGGATG TGCCAGCACC AATTTTGCGC AGCGATGTGC TGGCTTTTGA AGATTTGCAG
CCGGGCATGC AGCTCAAAGG CACAGTGCGC AATGTCGTCG ATTGGGGCGC ATTTATCGAT
TTGGGGGTTA AGCACGATGG CTTATTGCAC CGTTCGCAAA TTCCCCGTGG CCTGAGTTTG
AGTGTTGGCG ATATTGTCGA TGTTAGCATT CAATCGATCG ACCCAGATCG CAAACGGATT
GCCTTAGTTT TAGCACAATA A
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| Protein sequence | MDYAHLIAKG LTVRAEQVTA AIQLFDAGNT LPFVARYRKE QTGGLDEEQL RSIQSQIARL
RELDERREAI LSALREQGNL SDELAQALAA ATDKTTLEDL YAPFKPKRRT RASIARERGL
EGLAEIIQMQ PNDPIDATAR QFLNEQVASI EEALAGARDI VAEQISDHPE VRRQTRERAL
RWGVVRSELI ADAEDSKGVY QTYYQFESTA SRLKPYQVLA LNRGETEHIL RFKIQMDQRD
WFDVVAKYFP LDQRSAWAEQ LRLAIHDGAE RLLLPAIERD VRRALTEQAE SHAITVFAKN
VHSLLLQAPI ANNVVLGLDP GYRTGCKVAI IGQTGNVLTT ATIYPHSGAA ARERAFQELQ
SLIKRYAVSL IAIGNGTASR ETEQLVADVI RHQTGLHYLI VSEAGASVYS ASTLARSELP
DLDVSLRGAV SIARRVQDPL AELVKIEPKA IGVGMYQHDV DQSALGNALD GVVESAVNNV
GVDVNTASPA LLRYVAGIGP KLSAQIVSHR EEHGPFRSRV ALKKVKGLGP KAFEQAAGFL
RIRDGDEALD ASAIHPESYT VTRNLLDKLN INAKTGRNER IKRLEDLKNQ PLHSLAAELG
TGVPTLSDII DQLLRPGRDP REDVPAPILR SDVLAFEDLQ PGMQLKGTVR NVVDWGAFID
LGVKHDGLLH RSQIPRGLSL SVGDIVDVSI QSIDPDRKRI ALVLAQ
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