Gene Haur_3273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_3273 
Symbol 
ID5735141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp4135931 
End bp4137694 
Gene Length1764 bp 
Protein Length587 aa 
Translation table11 
GC content49% 
IMG OID641280419 
Producthypothetical protein 
Protein accessionYP_001546038 
Protein GI159899791 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000120347 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTCGAA TCACATTTCG CTATTTGGCC TTGATTGGCC TGCTTTTACT TGGCAGTAGT 
TGGTTGCCCG CAGCTTCGGC TGAAACCTCG GTGGCAAACC TCAGCGACCT TGCGACTGGA
GCAACCTCAT CGATCAGCAA TGAATCGATT AATCTAGCCT ATAACGGGTT AAGCTACTTT
GTCGCTAACG ATGGTAATAA CGGTGTTGGT TTATGGCGCA GTGATGGGAC GGCTGCTGGA
ACCTTTATGC TGACCACCGC CGCACAAAAC GCGATTAGCC CGCAATATCT TGTTGGCTAT
GGTGCATATG TCTATATTGC AGCCCATACC GAGACTGATG GCTACTCGAT TTGGCAAACC
GATGGTTCAT CCAATAGCAT TACCAAGGTT GTCAGCCTCG ATCCAAGCAA CTACTCCACA
GGCTATGTCA AAATTAGCCT GATGCAGGTT GTGCAAAATA CGCTGTATTT CATTTTTTCC
TATGAAGGGC AGATTGAAAT CTGGAAACTT GATCAGGCCT TAGCACCAGT GCTGGTTAAA
AAGGCGGTTG CCTTTAATTC TGCGTGGTCG GCGAGCAATA TTGATCGCTT GGTTGAATAC
AATGGGGCAA TCTATTTTGT TACCTCAACC ATCACGATTA TTACCTATGG TGCTACCTCC
GATTTATGGC GAACTGATGG AACGGCTGAG GGAACCTACA AAGTTCATTC AATCGATACC
CGTAAATATG CTCAGGTTCT GGGACCCATT GTCGCTGGTG GCAAACTAAT CTTCAATTCA
TTTCATGATG GGGTTGTGAC AAGCGATGGA ACTCCAACGG GCATGGTGCG TTTTGAGAAT
CGCATTGATG TTGGCGAGGG TCCCATGCAA CTTACCAGCG TCAATGGGAT TGGCCTGATG
ACCTATTTTG GTGGTGAGCG CTTATGGAGC ACTGATGGGA CGGTTGCGGG AACCTACCCA
ATTGATGTTA ATCCAAATGG CCTTGATAAT GTCAGTTTTG GCCCAGTGAT TGGGAAGTAT
CTTTACTTCA CCGCCGACCA TGCGAATTAT GGCCGCGAGC TTTGGCGCAC TGATGGCACA
ATCGCTGGGA CGACCCTCGT GCACGATGGT ATTCCAGGCG TAAATGCTAG CAACCCAAAA
AACTTGGCAG CAGTTGGTAA TCAATTGTAC TTCAGTGCTG CGACTGCCCA AGGTGGCGTG
CAGCCATGGA AATTGACTTG TGCTGGTGCA AACCCAACAA TGCTTGGCCT AGTTGGTTCA
AATACGGTTA ATGCTGACCC TGGTTTATTT CTTGCCACTA CTCAAGGCGT AGTGTTTGGG
GCTACAACGC CATCCCTTGG TCACGAGCCT TGGCTGTACC GCGAAAGTGG CAATACATGG
CTGAAGAGTA GTACCGTCGT CGGAACGGCC AGTGAGCAAG TTGGCGCAAT TCCGGTGACA
ATTGGTAATG ATGGCACGCT TATGCAGCAA AGCATTACTG TAACGTTGAC CCTCACCGAT
GGAGTCGAGT ATCTTAGCGA TACGAGCGGA ATTACCCCAA CCATCCAAGG CTCGATGCTG
ACATGGCAAC TGAACCAGAT TCCTACGAAC TGTAGCGAAC AAAGCTTTGT GGTCTATGTT
GGCTTACCCG ATGCCGAGGT TGGCGAACAA CGACCATTTT CCGTGACGAT CGGCGGTATG
GTTGCGGGCG ATATCAGCAA TGATAATCAG TCTAATGGTC TGATTGTGGT TGGTAATCCA
CTGTTCTTAC CAGCAGTTCA ATAA
 
Protein sequence
MRRITFRYLA LIGLLLLGSS WLPAASAETS VANLSDLATG ATSSISNESI NLAYNGLSYF 
VANDGNNGVG LWRSDGTAAG TFMLTTAAQN AISPQYLVGY GAYVYIAAHT ETDGYSIWQT
DGSSNSITKV VSLDPSNYST GYVKISLMQV VQNTLYFIFS YEGQIEIWKL DQALAPVLVK
KAVAFNSAWS ASNIDRLVEY NGAIYFVTST ITIITYGATS DLWRTDGTAE GTYKVHSIDT
RKYAQVLGPI VAGGKLIFNS FHDGVVTSDG TPTGMVRFEN RIDVGEGPMQ LTSVNGIGLM
TYFGGERLWS TDGTVAGTYP IDVNPNGLDN VSFGPVIGKY LYFTADHANY GRELWRTDGT
IAGTTLVHDG IPGVNASNPK NLAAVGNQLY FSAATAQGGV QPWKLTCAGA NPTMLGLVGS
NTVNADPGLF LATTQGVVFG ATTPSLGHEP WLYRESGNTW LKSSTVVGTA SEQVGAIPVT
IGNDGTLMQQ SITVTLTLTD GVEYLSDTSG ITPTIQGSML TWQLNQIPTN CSEQSFVVYV
GLPDAEVGEQ RPFSVTIGGM VAGDISNDNQ SNGLIVVGNP LFLPAVQ