| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_2953 |
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| Symbol | |
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| ID | 5734825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 3726676 |
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| End bp | 3728325 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641280097 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_001545719 |
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| Protein GI | 159899472 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGACTG ATGTGTATGT GGAACGGGAT GAAACGACGA TTGACCAGCA ACAAACCATC
ATCAACTTGC GTGCCCAGAT CGCGATCTAC GAACAGATTT TAGATAGTAT CCCCGATTTG
ATTTTATACA AAGGCCCAGG TTCGCATATT CGCTACGCCA ATCGCGCTTT TCGCGAATAC
TATGGCATGG ATAGCCAGCA GCTGCAAGAT CTGATCGACG CAGATTTTAA CCAACCAAGT
TATACCGAGC AATATATTCG CGATGATGCT CAGGTGTTTC AAACTGGCCA AGCCTTGGTG
ATCGATTCAG AGCCAGTTAC GCGCCATACC GGTGAAGTGC ATCTGTTTGC CACCACCAAA
CATCCCATTC GCAATCACGA TGGCTCGATC ATCGGCACGG TTGGCATTTC GCGTGATCTG
AGCAACGAGG TAGCGGCCTC GGCAGCCCTA ACCGATAACG AGGCTCGCTT GCAACGGATC
ATCGAAAATG TACCAGGCAT GGTCTATCAA TTTTTGCTTG AGCCAGATCA TACGATGCGT
TTTCCATTTG TCAGCACTGG CAGCCGCGAT ATTTATGGCC TCGAACCAGA AGCGATTATG
CAAAATGCCA GCATCGTGAC CGAGGCCGTC AATCCAGCTG ACCGACTGCG CTTTCAAGAG
GCGATTATGA CTTCGGCTCA AACGCTTGAG CCATGGCGCT GGGAAGGTCG GGTTTATATC
AATGGCCAAG AAAACTGGCT GCAAGGGGCT TCTCGGCCCA CGAAATTGGC CAATGGAGCC
ATTTTATGGG ATGGTTTGCT ATTAAATATT ACCCAACAAA AACAAGCTGA AGCCTTGTTG
GGGCGTTTTG ATACCATTCT AAGTTCGACC CCGGACTTGG TAGCGATTGC CGATTTGTCA
GGCCAGATGC AATATTTGAA TCCGGCGGCG CGGCGCTTGT TGCAACTTGA GCCAACCGAT
CAGGTCAGTC AATTAACCTG GCACGATTTA CACCCCAACC AAGCTGAGCA AACATGGCTA
GCCAAAACCT TGCAGCATGC CCAAATCCAT GGCTCGTGGA TGGGCGAGCA TCAACTACAA
ACGGCTCAAG GCCAAAAGCT CCCTGTGATG TATCAAATGC TCTGTCATTA TGATATTGAT
CACCAACCCA GCTTCTTCTC GATGATCGCC CATGATATTA GCGACCAAAA ACAGGCTGAA
GCTGAACGCC AACGCTTGCA CGAAGAAGTT ATTCGCACCC AACAACAAGC CTTGATCGAG
CTTTCTACCC CGCTGATTCC GATTGCCGAC ACGGTGGTGC TCTTGCCGTT AGTTGGCAGC
GTTGATACCG CGCGGGCACA GCAATTTATG GAAACCTTGC TCGAAGGTGT GCATATCAAT
AAAGCTCAAA TCGCAATTGT CGATGTGACG GGCGTTCCAG TGATGGATAC CCAAGTGGCA
GGCCTGTTGA TTCGTGCCGC AACCAGCGTC CAGCTACTAG GAGCACGCGT AATCATTACT
GGCATTCGGC CAGAATTGGC GCAAACCTTG GTTACCTTGG GGGTTGATTT CCGCTCGATC
ATGACGCATA GTAGCCTGCA ACAAGGAATT ACCTATGCGA TCAATGCGAC CCGTGGGCAG
CAAATGAATG TTAGGTATCG CGGAAATTGA
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| Protein sequence | MGTDVYVERD ETTIDQQQTI INLRAQIAIY EQILDSIPDL ILYKGPGSHI RYANRAFREY
YGMDSQQLQD LIDADFNQPS YTEQYIRDDA QVFQTGQALV IDSEPVTRHT GEVHLFATTK
HPIRNHDGSI IGTVGISRDL SNEVAASAAL TDNEARLQRI IENVPGMVYQ FLLEPDHTMR
FPFVSTGSRD IYGLEPEAIM QNASIVTEAV NPADRLRFQE AIMTSAQTLE PWRWEGRVYI
NGQENWLQGA SRPTKLANGA ILWDGLLLNI TQQKQAEALL GRFDTILSST PDLVAIADLS
GQMQYLNPAA RRLLQLEPTD QVSQLTWHDL HPNQAEQTWL AKTLQHAQIH GSWMGEHQLQ
TAQGQKLPVM YQMLCHYDID HQPSFFSMIA HDISDQKQAE AERQRLHEEV IRTQQQALIE
LSTPLIPIAD TVVLLPLVGS VDTARAQQFM ETLLEGVHIN KAQIAIVDVT GVPVMDTQVA
GLLIRAATSV QLLGARVIIT GIRPELAQTL VTLGVDFRSI MTHSSLQQGI TYAINATRGQ
QMNVRYRGN
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