Gene Haur_2878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_2878 
Symbol 
ID5734749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp3650418 
End bp3651302 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content51% 
IMG OID641280021 
ProductABC-2 type transporter 
Protein accessionYP_001545644 
Protein GI159899397 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGTGA TTCTCGATAA ACATACAGCA GTTGAACGTC AACCCAACCC ACGCCGTGGT 
AAAGGGCCAA GTGCTTTTAC AATCTTTTGG CGCTCAGTCA TTGGGCGGGC TTATCCACGG
ATTATCGGCA CGCAACGCGA ACTAAGTTGG TTGTTTTTCG ATATCTTTTT GCCATTTATG
GCCACCATGT CGTATGTGTT GGTCTATGAG GCGATTGGTG CGCCAGCTTC CTACAAGGGC
TTAGTGTTGG TCGGCGGAGC CATGACCGCC TTTTGGCTGA ATGTGCTTTG GTCGATGGCG
ATGCAGTTGT ATTGGGATAA AGAGCAAGGC AATTTGCAAC TATATATGCT AGCCCCAACC
TCGCGCATGG CAATTTTGAC GGGCATGGCC TTGGGTGGGT TGTTTGCAAC GACGATTCGT
GCCGCAATTA TTTTGATTGG TGGCTCGTTG ATCTTTGGCA TTCGCTATCA AGCCACCAAT
TGGTTTGCCT TGGTCGGCAT TTTCTTCTTG TCGCTAATTG CCTTGTATGG CATGGGCATG
CTGCTCAGCT CCATTTTCTT GGTTTATGGG CGCGGCGCTT GGCAGATGAC CGCCGCCTTG
CAAGAGCCAG TTTTCTTTGT TTCCGGCTTT CACTTTCCAG TTAAAGCGCT GGGCACGGTC
GTCGCAACTG GAGCTTCGGT TGTACCGTTG ACCTTGGGTC TTGATGCAAT GCGCCAATTG
CTGTTTCCTG AAATGATGCA GCAATTTCAA TTTTTGAGCG TTGGCACTGA AGCAGCAATT
TTAGCAGGCC TAGCCTTGGG CTTTGGCCTT GTCGCACGCT GGGCCTTGCT GCGCATGGAG
CGCAAATCAC GCCAAGATGG CCGCCTGACC GAGCGAGGCA ATTAA
 
Protein sequence
MSVILDKHTA VERQPNPRRG KGPSAFTIFW RSVIGRAYPR IIGTQRELSW LFFDIFLPFM 
ATMSYVLVYE AIGAPASYKG LVLVGGAMTA FWLNVLWSMA MQLYWDKEQG NLQLYMLAPT
SRMAILTGMA LGGLFATTIR AAIILIGGSL IFGIRYQATN WFALVGIFFL SLIALYGMGM
LLSSIFLVYG RGAWQMTAAL QEPVFFVSGF HFPVKALGTV VATGASVVPL TLGLDAMRQL
LFPEMMQQFQ FLSVGTEAAI LAGLALGFGL VARWALLRME RKSRQDGRLT ERGN