Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_2878 |
Symbol | |
ID | 5734749 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 3650418 |
End bp | 3651302 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641280021 |
Product | ABC-2 type transporter |
Protein accession | YP_001545644 |
Protein GI | 159899397 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCGTGA TTCTCGATAA ACATACAGCA GTTGAACGTC AACCCAACCC ACGCCGTGGT AAAGGGCCAA GTGCTTTTAC AATCTTTTGG CGCTCAGTCA TTGGGCGGGC TTATCCACGG ATTATCGGCA CGCAACGCGA ACTAAGTTGG TTGTTTTTCG ATATCTTTTT GCCATTTATG GCCACCATGT CGTATGTGTT GGTCTATGAG GCGATTGGTG CGCCAGCTTC CTACAAGGGC TTAGTGTTGG TCGGCGGAGC CATGACCGCC TTTTGGCTGA ATGTGCTTTG GTCGATGGCG ATGCAGTTGT ATTGGGATAA AGAGCAAGGC AATTTGCAAC TATATATGCT AGCCCCAACC TCGCGCATGG CAATTTTGAC GGGCATGGCC TTGGGTGGGT TGTTTGCAAC GACGATTCGT GCCGCAATTA TTTTGATTGG TGGCTCGTTG ATCTTTGGCA TTCGCTATCA AGCCACCAAT TGGTTTGCCT TGGTCGGCAT TTTCTTCTTG TCGCTAATTG CCTTGTATGG CATGGGCATG CTGCTCAGCT CCATTTTCTT GGTTTATGGG CGCGGCGCTT GGCAGATGAC CGCCGCCTTG CAAGAGCCAG TTTTCTTTGT TTCCGGCTTT CACTTTCCAG TTAAAGCGCT GGGCACGGTC GTCGCAACTG GAGCTTCGGT TGTACCGTTG ACCTTGGGTC TTGATGCAAT GCGCCAATTG CTGTTTCCTG AAATGATGCA GCAATTTCAA TTTTTGAGCG TTGGCACTGA AGCAGCAATT TTAGCAGGCC TAGCCTTGGG CTTTGGCCTT GTCGCACGCT GGGCCTTGCT GCGCATGGAG CGCAAATCAC GCCAAGATGG CCGCCTGACC GAGCGAGGCA ATTAA
|
Protein sequence | MSVILDKHTA VERQPNPRRG KGPSAFTIFW RSVIGRAYPR IIGTQRELSW LFFDIFLPFM ATMSYVLVYE AIGAPASYKG LVLVGGAMTA FWLNVLWSMA MQLYWDKEQG NLQLYMLAPT SRMAILTGMA LGGLFATTIR AAIILIGGSL IFGIRYQATN WFALVGIFFL SLIALYGMGM LLSSIFLVYG RGAWQMTAAL QEPVFFVSGF HFPVKALGTV VATGASVVPL TLGLDAMRQL LFPEMMQQFQ FLSVGTEAAI LAGLALGFGL VARWALLRME RKSRQDGRLT ERGN
|
| |