Gene Haur_2672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_2672 
Symbol 
ID5734537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp3425987 
End bp3426889 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content50% 
IMG OID641279814 
ProductABC transporter related 
Protein accessionYP_001545438 
Protein GI159899191 
COG category[R] General function prediction only 
COG ID[COG4152] ABC-type uncharacterized transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.425869 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATGT TAAATATTGT TGATGTTAAA AAATCTTTTG CCGGAACTGA AGCAGTTCGG 
GGAGTAAGTT TTAACGTCGA ACCTGGCGAA TTGTTTGGGG TACTTGGCCC CAATGGTGCG
GGTAAAACCA CCACTATCCG CATGATTTTG GATATTTTGC GCCCCGACAG CGGCTCAATT
GAGGTGCTGG GCGGCGCAAT GGATGAAGCC AAAAAGAACC GCATCGGCTA TCTGCCCGAA
GAACGCGGTC TGTATCGCAA CCTTAAAGTT CTAGATTGTA TGGTCTATTT GGCGACACTC
AAAGGCCTTG AGCGCAACGA GGCTCGCAAA CGCGCCAGCG ACTATCTTGA ACGGGTCGAG
CTTGGTCATG TGGCCCAAAA GAAGGTCAGC GAACTAAGCA AAGGGATGCA GCAAAAAGTA
CAATTTGGCA CAACTATTTT GCACGAACCC GATATTGTGA TTATCGACGA ACCATTTGAG
GCGCTTGACC CAGTAAACAC ACGTATGGTC AAAGATCTAT TGTTTGATAT TCGGCGCGAA
GGTCGGGCAG TGCTGATGTG TACCCACCAA ATGCACTTAA TCGAAGAAAT GTGCGACCGG
ATTGTGATGT TCAATCGTGG CGAGATTGTT TTGAATGGGA CATTGCGTGA TGTTCGCCGC
CGCTTCGCTC CCAATGCCGT TTGGGTTGAA GGCCATGGCT CATTCGATAA TTTGCCAGGC
ATCGAGAGTG TCCAAACTGA AAACGGCCAA GTGCAGCTCA ATTTGCAAGC TGGCACCAGC
CCGCAAAGCG TTTTCCAAGC CTTGGCCAGC CGTAGCGACA CCACCGTTGA TCGTTTTGAA
GTAGCGATTC CCTCACTCGA CGATATTTTT GTGCGAGTGG TTAATGGGGA GCGTGGCCAA
TGA
 
Protein sequence
MAMLNIVDVK KSFAGTEAVR GVSFNVEPGE LFGVLGPNGA GKTTTIRMIL DILRPDSGSI 
EVLGGAMDEA KKNRIGYLPE ERGLYRNLKV LDCMVYLATL KGLERNEARK RASDYLERVE
LGHVAQKKVS ELSKGMQQKV QFGTTILHEP DIVIIDEPFE ALDPVNTRMV KDLLFDIRRE
GRAVLMCTHQ MHLIEEMCDR IVMFNRGEIV LNGTLRDVRR RFAPNAVWVE GHGSFDNLPG
IESVQTENGQ VQLNLQAGTS PQSVFQALAS RSDTTVDRFE VAIPSLDDIF VRVVNGERGQ