Gene Haur_2224 details

Gene Information

• Locus tag: Haur_2224
• ID: 5734111
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Herpetosiphon aurantiacus ATCC 23779
• Kingdom: Bacteria
• Replicon accession: NC_009972
• Strand: +
• Start bp: 2821969
• End bp: 2829453
• Gene Length: 7485 bp
• Protein Length: 2494 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 641279365
• Product: YD repeat-containing protein
• Protein accession: YP_001544992
• Protein GI: 159898745

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCGTAA ACCGCCCCTA TCGACGATTG ATTCACGTTG GAATGCTCTT GAGCATGCTC 
TGGTCGCTCT TCCCAGCGAG CCAGCCAGCC ACCGCCCAAA CTGATCAGTC CAACAAAACG 
GTTGAGCAAG CGTTTGCTCC CGATACTGGC CTAACACGCG ATCCGCAAAC CCCGCGTTTA 
GCAACTGCGC TACCAAAAAA AGCCAGCAGC AGGGCTGATT TTATGCCTGT GGCGGCCCAA 
AACTTAAGCA TTCAGCCGCA ACTTAATCAG GTGGTCACTG CCCAACTTGA TAGCGCCAAA 
ACCACCGCCG TACAATTCGA GCAAGCGCCG TTGAGCTTGT TGGTTGAGGC CGATACCTTC 
GCGACCGCTA CGCGCTTGGA GTTTCAAGCT CAAGCCTTGC CAAACTTGAC CCAACAGCTC 
CAACGCAGCA GCAAAAGTGA AGGCTACCTG CGCGACCAAG CTGAGCAAGT TACGTTCTAT 
CGCTTTAACA TCGAAGCCCA AACCAACGAT CAAGCTGCCA ACTTCAAAAA ACCAGTGCGC 
ATGGTGCTCG ATTTGCGCCA ACTCATGCGC GATGTTCCCA GCAATTATCA ACAATTTTAT 
TTGGCCTACC AAGATCAAGC CGATCCCAAC CACTGGATCG AAGTGCCAAT TACCTTACAC 
GATGCCAAGG GCTTGATTAG CGCCGATGTT GACCATTTTT CGACATGGGC AGCTGGCACA 
CGGCCAGAGC GTTGGAATCC CAGCTGGGTT CCAGCAGCAG TTGCCAGTTT TAGCGGAGCA 
GCCACCTATG CCTACCCAAT TGAAGGCCCA ATGGGTCGTG GTGGCCTGCA ACCAAAAGTC 
GAATTAAGCT ACAACAGCCG GAGCCTTGAT GGCCGGATTC GCGATGACAC TGGTGCAGGC 
CCACTGGGCG ATGCTTGGTC AATCAGCGAT ATTAGCATTG CACGGGTTGG GGTAAAAACT 
GAATTCGTTG CGGGCTTTCC ATCCAACAAA CATCCCGACA ACTTCCGTTT GACGATCAAC 
GGCGCTGGAC ATGAACTCTT CCCTGAGTTT CCCAGCCAAA CTGCCACTGC CAGCAGCATG 
CGCTATTTTG CCAAAGATGC TCCAGGCTAC TACATCAAAC GGGTCTATAA CACGGCCACC 
CCCAATACCG ATGGAATATA TTGGATTGTG GTAACGCCAA CGGGTGTGAC CTATCGTTTG 
GGTTATTATC CTCACGCCGA AGAACACCAA ATTTGGGATA TTGGCTATTG GAATGTGCAA 
GGCCATCAAG GCCGCCCCAA TAACGAACGC TCAGCCTTGG CTTGGCATGT CGATACGGTC 
ACCGATCGCG CTGGCAACCA GATGACCTAT CAATATGTCA ACTGGACAGT CACCGAGCCA 
ATTGAGTGGT ATCTCCAAGG CTCAAGCCAT AAATCGACCT TGCAATTAAC TACGTGGAAA 
AGCCGCATCG GCAGCATTAG CTACAATTAC CCAAATCGGG TGACGGCCTT GCCAGTCAGC 
GATACCGTTG CTCAATTGAG CACTACTCCT GCCAGCCGCT TGGTATTTAC CACCAAAACC 
CAATTTGCCT ACCTGATCGA CACAATTTAT GTCTATCATG GCTCGTTGAG CACCCCAATT 
AAAGAATATC GGATTAACTT ATCAGGCCAT TTCGTTGATA GTCCGGCCTG TATGAACCAA 
GATACTCAGC CGAATATTCC GCGCTCAACT CATACTCGGG TGGTCAATGC GATTACGGTC 
GCTAGCGGGG TTGATGCCGA CCCAACAACC GAAGATGGTT GGACTTTGCC CGCCACCAGC 
TTTACCTACG AAGCCAAACC ACATTACAAC AACAATTGTT TCTCTTTCTA CTATCTCAAG 
AGCATGCGCA GCAATTATGG TGGTGAAATC AGCTTCAATT ACGCCTCGGA TAATCGTTGG 
ATTGGCGATT ATACCTACCT AGGCTATGAT CGGTATGTTT GGCCAAGTTT GGGCCAAAGC 
TATTACGTGG TCGAAACTTT AGCCAACGAC GGGCGTAATC CTGCCGTCAA AACCACCTAC 
AGCTATAGCC AGCCCTGTTA TGGCCAATGG TCAAGCAACG TTCCCGCAGG CGCAATCACT 
TGTGGCGCAA GCGATGCTCC CGAGTTTGGC ACAATCACTG GCTTTGCCAC GGTCAATCAA 
CGCAGCTACG ATTTTAACGG CACAACGCTG CTCAAACGCA ACGAAACAAT TTTCTCGCAA 
AATAGTGCTA CCACCAGTGG CAAGCCCATG ATTCAGCGCA ATTTTGCTGG CGATGGAACG 
TTGTTGGATG CAACCCACAG CACCTACAAC ACCGATAGCC TGCATGGCTT GCCCAATATG 
TTCACCTATT TGAGCGAAGT TAAGAGCTAT CAATATAGCA ACGGCCTTGA AATTTCGACC 
AAGCGCACGT TTGGTTACGA TGTGGCCAAA CAAGCTGGCG TGCAATATGG CAACCTCACC 
GACACTTGGC TCTATGCTAG TGCTGCTGCA ACGACACCTT ACGAAAAACA AGTTACCTAT 
TACACGCCCA ACAATGGCCG AGCCACTGGA GGCCAAGCCT GGATGGTCAA CGCGCCCACA 
GCCAGCGGTC GTTACGATCA ACAAGGCACA TTTTTAAACG GCACATGGAT CTATTATGAT 
GGGGCCACAA CCAACGCTAC TGCCCCAACC CAAGGCTTGG TCACCCGCAG CCGCCAAACT 
CGGCCTATTA CTTGTGCTGA GATTCCAAAT CCAAGCGGCT TGCCACAACC AGCTGACCCT 
AATTGTGTCC ATGCCTTCCA AACCATCGAT AGCGATATGA CTTACGATAG CTTTGGCAAC 
CCCAAAACGA CCACAATCTA CAGTGGCTTT GGCTATCGTT CGCTCAAAGC CAACTTTAGC 
GATTCGCTCG ATTGGAAGCC CACCGAAACT GGCCAACCAA ACCTGAGCCA AGTTGCCAGT 
TTGTGGTACG ACAGCGATTA CAATCTATAT CCAGTCAAAA CCACTAACGC ATTAAATCAA 
GCTACAACCT ACGAAATTTA TGGTTTCCGC AACGATGCTG GCAACATCGC CGCCGTTGAT 
GGCTTCCAAA TTCAGACTGG CTTGCTCAAA AGTGTCACCA ATCCCGATGC CACGATTGTA 
CGCTACGAGT ACGATCCATT TGGTCGCTTA GTCAATACTT TCGATAGCTA TAGCTTCACG 
GGCTTTGGCG ATAGCACCAA GTGGAACGGC AATCCAGTTA TTCGCTACCG CTATTGGGAT 
AATTATTGGA ACGACAGCGC GGTTTTTGCC AATCCTGCTG CCAATCAACC ATTCCTGATC 
AGCGATGAAA AGCGGCCTGG CAGCTATGCC AACCCCAGCA GCACTGGCAA TTTCGCCTAC 
AACGACCAAA CCATGTACGA TGGTTTTGGC CGCGCTATCC AAAGCCGCCA TATTTGGGCC 
GATGTTGATG GCGAAGCCAA GCGCCAAGAA ATTTATAGCA CAACCGCCTA CAATGCACTC 
GGACAGACAA TCTGCCAAAC TGCGCCGTTC AACCTGCCGT TCTACATCGA TCGCGGTTTG 
GTTTGGCCAG CGTCACCCTT CGTCACCACG CCATGCAGCG ATAGCAGTAT GGCCAAAACC 
CTGACCAGCT ACGATAATTT TGGGCGGGTC AAGCAAACCA CTGCCGCCGA TGGCAGCCTT 
AACAAAGCCA ATTGGAGCTT AGTTAACAAC ATCACGGTTG CTGGCCAAAA TCTCTTCTGG 
CAGCATCAAC AAATTAATCC CAAGAACCAA CTAGAAATGC GCTTGATCAA CAATCAAGAA 
CAGTTGGTCT TGCGGCGCGA ATATCGCGGT ACTGCCGATA GCCCAATCGT TTATAGCGAT 
ACCCAGTTCC AATACGATAC CCTCGGCAAT ATCAACAAAA TCAGCCGCCG CCAACCTAGC 
AACGCTGGCA ACGGAGCGTT GATCGCACCC GAAGCAACCA TGGTTTACAA CGGCTTTGGC 
CATAAGTTGC AAATCAACGA CCCCGATATG GGCACAATCA AGTATCGCTA TAACGCCAAT 
GCGCGAATTA TTGAGCAACG CACGCTCAAC GATAGTCTGC TTACGAACGA TGACGATGTT 
GTGTGTTTCT ATTTCGATGC GTTGCAGCGC AATACCAGCA AAAATACCAC CAATGCTGGC 
GCTAATTGTT CTAACACGCC AATTTTGAAC GGGGCGTTGT GGCTAGCCAA CTCAAGCTAC 
TACAGCAGTG GCGCAGGCAA AATCGGCAAA CTCCAATCAG TTAAATGGAA TCGTGATGGT 
AATGGCGCGG TTGATGGCGA AAGTTTCAAC TACAATAGCC TTGGCTTGCT CACCAGCCAT 
ACGCGCACGC TCAATGGCGT AAGCTTTAGC ATGCAATTTG GCGACTTCGA TGCCCTCAAT 
CGCGCCACCA CAATCACCTA TCCCGATGGC GAAGTCGCAA CCATCACCCA CGATTTAGAA 
GGCGAAAATA GCCTGAGTTT GGGCAGCCAT GGTGCGTTGG TAAGCAATAT CGAATACAAC 
GCCCGTGGCC ACATCAGTCT AATCGATCGT ACAAATGGCG GGCATAACAC GGTCTTTAAT 
TATTATGGCG CAACTGGCAC GGCCAACACA GGCAACAGCA ATTTCCGCCT AGCTAGCATC 
AATCATCAAC ATAGCCTGTT GCCGAGCTAT ACCTACGAGT ACGATCAAAT CGGCAATATC 
AGCCTCCTCT ACGAAAGTGG CTCGCTCTCG GGCAATACCT ATTTCAATTA TGATGAATTG 
GATCGTTTGA CCAGCACCAG CGGCATTTAC AGCCATATCT ATGCTTATGA CAAGCTGGGT 
AACTTAACCA ACAATAATGG CATTGCTCAA ACCTACAACG GCATAGGTAC TCAGCCGCAT 
GCGCTGCGTT CAACCAGCCA AGGCAATTTC TTCGAGTACG ATCAAGCAGG CAATATGATC 
GTGCGCAACG ATGCTAGCGG CCTGTATCAA CAAGCCTTCG ATGTTGAGCA ACGCTTGTAT 
GAAGTGATCG ATCAACACGA TCAAACCACG CGCTTCCGCT ATGATCCCAG CGGCCAGCGC 
ACTACCACCT TCGCCGCTGA TGGCACAGTT ACCTACGATC CTTTCCCGAA TTATCAACGC 
ACGACCGTCA GCAGCAGCAA CTCAGCCGTG GATAGCCTCA ACGCTGGAGT TCTGTGTAGC 
GATTACAACC CTGAAACAAA AAGCTATGGC GGCGCTGGCT ATATTATGTA CAGTGAAATC 
CCAGTCAAAC AGCGCTTTGG CAATTTGCCA GCGGCCAACA TCAGCGACCA CTTCATCTGT 
GTGCGCAACA ATACTGGCGT TTGGGAATAC GATAACGATG CTGGCTTCTA TGCATTCACT 
CCGATTGCCA GCGACTTGTT GGTCGCCAGT TTCAACTACA ATGCAACCAC AGTCAGCCCA 
TATCTCAATC AATCAGGGGC GATTTATGGC CTGCGCTATG GCTATACCAC CAGCAACCTA 
GCCTTCAGCA AAGATGTCTT TGGTGGAACC AACAATCCAG GCGAGTTCGA AATTGCTGGA 
ACCCACTTCA AAACCAATGC CTTTGCCCAA AGCGTCGCCA ACCATGGCTA TGGTGTGGCT 
TGCCAAGAAG ATGCAACTGG CACAGGCTAC CTGATGTACA GCGCTGAATC GGTGCATAGC 
CGCTTCGCCG AGCAAGCGCC CGATATCAAC AATGCTGCGC ACTTCATCTG TGTACGCCAC 
AACGGCCAAA CCTGGCAATA CGATAATAAT TCGGCCTATT TCGCCTTTAC TCCACGCCAA 
AGCGACCGCT TGATCGGCGC AATCGATTTC AGCAACGATA GCTACACCAG CTATGTCGGC 
CAAACTGGCA CGATCTTGGG CATGCAAAAA GGCCTAAGCA GCAGCAACTT AACCATCACG 
GTCAATCAAT GGAATGGCGA GAGCAACCCA GGCGAATTTG GGATTGCTGG CTTGAATTTC 
ACGCCGCAAG CCTACGAAGT AACGATCACA TCGGCAGGCA TGGGCATCAA TTGTTTGGAT 
ACCGCGACAG GCACTGGCTA TATCATGCAC AGTCGCCAAG CCCTGAACCA ACGCTTTAGC 
CAATCGATCC CAGCGCAACT TGCCAGCAAA CACTTTGTTT GTGTGCGCTA TAACAGCACG 
CTCAGCACTT GGCAATACGA TGATGGCAGC AATTACTATG GCTTCACGCC ACGCGCAAGC 
GACACCTTGG TTGCCAGCGT CAACTTCAGC ACCGACCAAG TAACGAGCCT CGCGGGAGCA 
AGCGACAGCG AATTTGGCAT AACCAAAGGC TTTGTCAGCG GTATTAGCAT CGTCGCCAAT 
CAATGGGGCG GCAATAGCAA TGCTGGTGAG TTTCAAGTTA TTGGCAACAA TTTAACCACG 
CATACGATTG ATATCGGCAG CAAAACTGTG GCAATCGCTG GCACGCCAAT CGCTACCCGC 
CGCAAACATA GTGTCGCCAC AAGCTTGGTT GATCAATCAT TAGTGTTTGT GTATGTCGAT 
AAGCTCGGCA GCGCCAACAC TTTGATGGAT CAAACGGGCA CAGCGATTTT GAATAATGTA 
CGCTATCTGC CATTTGGCGA GGAACGCCTA GGCCTCAACT CAGCCTATAG CGATCGCGGC 
TTTACTGGCC ATCAAGAGAA TCGTGAGCTT GGCCTAACCT ATATGAATGC CCGCTTCTAT 
CTGCCAAGCA CTGGCCGCTT TATCAGTGCC GACAGCATGA TTCCTGAGCC GAGTAATCCC 
CAAAGTTTCA ATCGCTATAG CTATGTCTAC AACAACCCAA TCAACGCGAC TGATCCTTCG 
GGTCACTTGC CAGGTGATGA TGAACCTGAA ATTCCAAATC CGTTCCCTGA ATCGAATCCA 
ATCCCTAATA TGGAGTACAG CGCCTATAGA AAATGGCTTA ACTTCTGGCA AGCCTATACC 
GACAACGATA ATCCCTACAT CATGATTAAA CAAGGAGATC AACTTGTTGA AAGCTCAGTT 
GCAATCAAAG CGGGGTCTGT CAGTCTAAGC CCAGATAGCG TTAGTGTTGC TGGAAATTGG 
GGATTGGTAG GTGCTGAAGT ATCAATGCCA GGAGCATATA AGAAAGGTGA AGGCGATAAT 
TTCTTAGAAA CACTGTGGGA AGGAACATCA GCAAAAATAT TAATAGGTCC ACAGATCGAC 
TTAATTGTTG TCGAAGTGAT GCCTTTAGCA TTGGGGATCG ATCCATTTAC TGGTAATATT 
ACCCTCGAAA CAAGCGCAGG AATTGGACTA GTCGAGGGAA GTACTACAAT CAATCCGTTT 
GCCAAAACAG ATGCGATCTA TGTTTTGCAA ATCAGCGATG AATTGCATGA TAAGCTGATG 
GGTCGAGATC CATGTGCCTT GAGTGTTTCG TTCCAAGATC AACAAGCAGC TTGGACGGAA 
TTAATCAATG TAGTCAACAG CTATGGGTTT AATGGCACTG ACCCTCGCTG GACACTCCAT 
TCAATTCCAA ATTACGTCTA CAATGGCGAG GAAAACACAC CCTGA 

 

Protein sequence

MSVNRPYRRL IHVGMLLSML WSLFPASQPA TAQTDQSNKT VEQAFAPDTG LTRDPQTPRL 
ATALPKKASS RADFMPVAAQ NLSIQPQLNQ VVTAQLDSAK TTAVQFEQAP LSLLVEADTF 
ATATRLEFQA QALPNLTQQL QRSSKSEGYL RDQAEQVTFY RFNIEAQTND QAANFKKPVR 
MVLDLRQLMR DVPSNYQQFY LAYQDQADPN HWIEVPITLH DAKGLISADV DHFSTWAAGT 
RPERWNPSWV PAAVASFSGA ATYAYPIEGP MGRGGLQPKV ELSYNSRSLD GRIRDDTGAG 
PLGDAWSISD ISIARVGVKT EFVAGFPSNK HPDNFRLTIN GAGHELFPEF PSQTATASSM 
RYFAKDAPGY YIKRVYNTAT PNTDGIYWIV VTPTGVTYRL GYYPHAEEHQ IWDIGYWNVQ 
GHQGRPNNER SALAWHVDTV TDRAGNQMTY QYVNWTVTEP IEWYLQGSSH KSTLQLTTWK 
SRIGSISYNY PNRVTALPVS DTVAQLSTTP ASRLVFTTKT QFAYLIDTIY VYHGSLSTPI 
KEYRINLSGH FVDSPACMNQ DTQPNIPRST HTRVVNAITV ASGVDADPTT EDGWTLPATS 
FTYEAKPHYN NNCFSFYYLK SMRSNYGGEI SFNYASDNRW IGDYTYLGYD RYVWPSLGQS 
YYVVETLAND GRNPAVKTTY SYSQPCYGQW SSNVPAGAIT CGASDAPEFG TITGFATVNQ 
RSYDFNGTTL LKRNETIFSQ NSATTSGKPM IQRNFAGDGT LLDATHSTYN TDSLHGLPNM 
FTYLSEVKSY QYSNGLEIST KRTFGYDVAK QAGVQYGNLT DTWLYASAAA TTPYEKQVTY 
YTPNNGRATG GQAWMVNAPT ASGRYDQQGT FLNGTWIYYD GATTNATAPT QGLVTRSRQT 
RPITCAEIPN PSGLPQPADP NCVHAFQTID SDMTYDSFGN PKTTTIYSGF GYRSLKANFS 
DSLDWKPTET GQPNLSQVAS LWYDSDYNLY PVKTTNALNQ ATTYEIYGFR NDAGNIAAVD 
GFQIQTGLLK SVTNPDATIV RYEYDPFGRL VNTFDSYSFT GFGDSTKWNG NPVIRYRYWD 
NYWNDSAVFA NPAANQPFLI SDEKRPGSYA NPSSTGNFAY NDQTMYDGFG RAIQSRHIWA 
DVDGEAKRQE IYSTTAYNAL GQTICQTAPF NLPFYIDRGL VWPASPFVTT PCSDSSMAKT 
LTSYDNFGRV KQTTAADGSL NKANWSLVNN ITVAGQNLFW QHQQINPKNQ LEMRLINNQE 
QLVLRREYRG TADSPIVYSD TQFQYDTLGN INKISRRQPS NAGNGALIAP EATMVYNGFG 
HKLQINDPDM GTIKYRYNAN ARIIEQRTLN DSLLTNDDDV VCFYFDALQR NTSKNTTNAG 
ANCSNTPILN GALWLANSSY YSSGAGKIGK LQSVKWNRDG NGAVDGESFN YNSLGLLTSH 
TRTLNGVSFS MQFGDFDALN RATTITYPDG EVATITHDLE GENSLSLGSH GALVSNIEYN 
ARGHISLIDR TNGGHNTVFN YYGATGTANT GNSNFRLASI NHQHSLLPSY TYEYDQIGNI 
SLLYESGSLS GNTYFNYDEL DRLTSTSGIY SHIYAYDKLG NLTNNNGIAQ TYNGIGTQPH 
ALRSTSQGNF FEYDQAGNMI VRNDASGLYQ QAFDVEQRLY EVIDQHDQTT RFRYDPSGQR 
TTTFAADGTV TYDPFPNYQR TTVSSSNSAV DSLNAGVLCS DYNPETKSYG GAGYIMYSEI 
PVKQRFGNLP AANISDHFIC VRNNTGVWEY DNDAGFYAFT PIASDLLVAS FNYNATTVSP 
YLNQSGAIYG LRYGYTTSNL AFSKDVFGGT NNPGEFEIAG THFKTNAFAQ SVANHGYGVA 
CQEDATGTGY LMYSAESVHS RFAEQAPDIN NAAHFICVRH NGQTWQYDNN SAYFAFTPRQ 
SDRLIGAIDF SNDSYTSYVG QTGTILGMQK GLSSSNLTIT VNQWNGESNP GEFGIAGLNF 
TPQAYEVTIT SAGMGINCLD TATGTGYIMH SRQALNQRFS QSIPAQLASK HFVCVRYNST 
LSTWQYDDGS NYYGFTPRAS DTLVASVNFS TDQVTSLAGA SDSEFGITKG FVSGISIVAN 
QWGGNSNAGE FQVIGNNLTT HTIDIGSKTV AIAGTPIATR RKHSVATSLV DQSLVFVYVD 
KLGSANTLMD QTGTAILNNV RYLPFGEERL GLNSAYSDRG FTGHQENREL GLTYMNARFY 
LPSTGRFISA DSMIPEPSNP QSFNRYSYVY NNPINATDPS GHLPGDDEPE IPNPFPESNP 
IPNMEYSAYR KWLNFWQAYT DNDNPYIMIK QGDQLVESSV AIKAGSVSLS PDSVSVAGNW 
GLVGAEVSMP GAYKKGEGDN FLETLWEGTS AKILIGPQID LIVVEVMPLA LGIDPFTGNI 
TLETSAGIGL VEGSTTINPF AKTDAIYVLQ ISDELHDKLM GRDPCALSVS FQDQQAAWTE 
LINVVNSYGF NGTDPRWTLH SIPNYVYNGE ENTP