| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_2193 |
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| Symbol | |
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| ID | 5734080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 2779227 |
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| End bp | 2781599 |
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| Gene Length | 2373 bp |
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| Protein Length | 790 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641279334 |
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| Product | carbohydrate-binding family V/XII protein |
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| Protein accession | YP_001544961 |
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| Protein GI | 159898714 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00201516 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACGTT TTTTTTCATT GATGTTGGTA TTTAGTTTAT TTGCGAGTCT CTTATTCAAC
CAAGCTACTC ACGCCGCACC AAACCCATGG GCAGCCAATA CGGCCTATGC GGTTGGCAGC
CAAGTTAGTT ACAATGGCAC GATCTATGAG TGTTTACAAG CCCACACGGC CTTAGTTGGT
TGGGAGCCAG CCACCACACC CGCGCTCTGG AAGCAGGTTA GTACTGCTCC AAGCGCTACG
ACAATTCCCG CAACAAGCAT TCCGCCAACC GCTCCCCCTG CCACAAATAT TCCGCCAACT
GCAACCGCAA CGCCGACGGC TGGCTGTTTA AATCCAGCGG CGGGCGTTGG TTGGCAAAGC
CGCAGTTTAA GCAACCAAAC TGGGAATTTT AGTTTGAGCT TTGAGGCAAC GCTGAGCGCT
AGCCCCACCA ATGCTGTGAT TGGCTTGGCC AATGCTGTGC CAACCGATTA CACTGGTTTA
GCAATTGCTG TGCGCTTTAA TCCAACTGGC TCAATCGATG CCCGCAACGG CGGAACTTAT
GCTGCTGCTA CCAATGTGGC CTACAGTGCT AATACACGCT ATCGTTTTCG GATTGTTATC
AATCTTGTGG CTCATACCTA CAGTGTTTAT GTTACGCCGC AGACTACTAG CGAAGTTTTG
ATTGCCAGTA ATTTTGCTTT TCGCAGCGAA CAAGCCAATG TGAGCAATTT AAACACCTTG
GCGACGGTGG TTGGTGGCAC AGGAGCCGTT GGCTCACTCA ATCTTTGCAA TATCAGCCTG
AATCTGCCTG CAACTCCAAC GCCGCTGCCA ACCGCAACGC CAACCCCACG ACCAACCGCA
ACCCCAGTGC CAACCGCAAC TCCAGCGCCA ACCGGTTATA CCCCAGCTTT TTGTGCCAAC
TATCCACCAG CAATCGTCGC AGGCAGTTGG CAATCATCGG TGGTCAGCTA TCACAATGGG
CGTTTGCAAT ATACCAACGA TAGTGCCCAA AACCGAATTC CTGATTTTAG CTATGCTGGC
TATTATTCAG GCCAACGGCC ACTGCCAAAT CTGGCGGTTG TCCAAACACT CAGCCCAATC
AGTGGCGATA ATACCGCCCG CATTCAACAG GCACTCGATG CAATTGGCAA TCGCACGCCC
GATGCCAATG GTTTGCGTGG AGCATTATTG CTTGCACCTG GCCGCTACAA CATCAACGGA
ACCTTACGCA TCAACAAAAG TGGCGTGGTG CTGCGCGGCA GTGGCGATGG CAGCGATGCT
AGCACTTCCA CGATTTTGCT AGGAGTTGGC AACACGCCGC ATCAACGCAC ATTAATTGTG
GTGGGCAACG GCGATTCAAC CCCGTGGACG GCTGGCTCCG CCACCAACGT GACCGACCAA
TTTGTACAAG TTGGCAGCAA AAGCTTGAAT GTAGCCGATC CCAGTCGTTT TACGGTTGGC
CAAGAAGTGA TTGTGCGCCA CCCATCATCA CAAGCATGGA TCAACGCGGT CAATGGTGGC
GGGGTAGTCA ATGACGCTTG GTGGGCGGTC GGTGCTTTAG ATATGACTTG GACGCGCCGA
GTAACTAAGA TTGCTGGTAC AACCCTGACG CTTGATGCTC CAATTTTCAA TCATTTGGAT
CGGGCGTTGA GCCAAGCGAC GGTTGCTCCG GTTGCCAGCC GCACTATCAT CGCCAATGCT
GGGGTAGAAA ATCTGCGGGT TGATATTCAG ACCGCTGGCG GCGAGGATGA GAACCACGTT
TGGGATGCAA TTGGGATTGT CGGGGCAGAA AATAGCTGGG TCAAAAATGC GACAGTCTTG
CACTTTGGCC ATGCTGGGGT GTTTACTCAA GGCGCAATTC GCATCACGGT TGAAGATGTG
CAGGCACTTG ATCCAGTTGG CATTCGGACT GGTGGCCGTT TTTACAACTT CGATGCCGAA
TCGAATAGCC AACTCGTGTT GTTTACGCGG GTTCATGCCA CTGGCGGTCG CCACAACTTT
ATTTCCAATG GAACTCAAAC CACCTCGGGG ATTGTTTGGC ATCGTTCGAC TGAAGGCGGC
GGCTCGGATA GCGAAGGCCA TCGTCAATGG AGCCAAGGTC TATTGTTCGA CACCATTAAT
GCTAGTGCCG CCAGCAATAT CAAGCTGATC AACCGTGGCG ATTATGGCAC ATCGCATGGC
TGGGGCAATG TGCATTCAGT CATCTGGAAC TACAATCGCA CGATGATGGT GCAAAAGCCG
CCAACTGGCC AAAACTATGT CATCTCACAG GCTGGCACGC GTAGCACCTC GTATCCCTTC
CCGGGCGCTG GTGGTTTTGC CGATATTCGC AGCGGCAGTT TAGTACCCAA TTCGCTCTAC
GAAGCTCAAC TTTGTGATCG GCTAGAACAG TGA
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| Protein sequence | MQRFFSLMLV FSLFASLLFN QATHAAPNPW AANTAYAVGS QVSYNGTIYE CLQAHTALVG
WEPATTPALW KQVSTAPSAT TIPATSIPPT APPATNIPPT ATATPTAGCL NPAAGVGWQS
RSLSNQTGNF SLSFEATLSA SPTNAVIGLA NAVPTDYTGL AIAVRFNPTG SIDARNGGTY
AAATNVAYSA NTRYRFRIVI NLVAHTYSVY VTPQTTSEVL IASNFAFRSE QANVSNLNTL
ATVVGGTGAV GSLNLCNISL NLPATPTPLP TATPTPRPTA TPVPTATPAP TGYTPAFCAN
YPPAIVAGSW QSSVVSYHNG RLQYTNDSAQ NRIPDFSYAG YYSGQRPLPN LAVVQTLSPI
SGDNTARIQQ ALDAIGNRTP DANGLRGALL LAPGRYNING TLRINKSGVV LRGSGDGSDA
STSTILLGVG NTPHQRTLIV VGNGDSTPWT AGSATNVTDQ FVQVGSKSLN VADPSRFTVG
QEVIVRHPSS QAWINAVNGG GVVNDAWWAV GALDMTWTRR VTKIAGTTLT LDAPIFNHLD
RALSQATVAP VASRTIIANA GVENLRVDIQ TAGGEDENHV WDAIGIVGAE NSWVKNATVL
HFGHAGVFTQ GAIRITVEDV QALDPVGIRT GGRFYNFDAE SNSQLVLFTR VHATGGRHNF
ISNGTQTTSG IVWHRSTEGG GSDSEGHRQW SQGLLFDTIN ASAASNIKLI NRGDYGTSHG
WGNVHSVIWN YNRTMMVQKP PTGQNYVISQ AGTRSTSYPF PGAGGFADIR SGSLVPNSLY
EAQLCDRLEQ
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