Gene Haur_2048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_2048 
Symbol 
ID5733937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand- 
Start bp2559184 
End bp2559747 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content55% 
IMG OID641279192 
Productintegrase domain-containing protein 
Protein accessionYP_001544819 
Protein GI159898572 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.212868 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACTG CACTTCGCCG CCGGATGACC GAAGATATGC AGTTGCGCGG CTTATCCCGC 
GCCACCCAAC AATCCTACTT GTACACCATC GGCTTGATTG CACGCTCCTT TGGTCGTTCG 
CCGGATCAGC TCACCGATAC CGATCTCCGA CACTATTTCT TGTATTTACG CCACGAGCAA 
CACCGCTCAC GCAGTACCAT TATTCGGACG CTGTGTGCGC TCAAATTCCT CTATGAACAG 
ACGCTTCAGC GTACCCTTCC CAGCTTGGAG TTAATCCGTG CCCCCAAAGA ACACAAGCTC 
CCTGTTGTGC TCTGCCCTGA GGATATTCGG CGCATCTTGG TCCAGATCAA GGTTGACCAA 
TATCGGGTCT GTTTGGCCAT CATCTATGCC TGTGGCTTGC GGCTCCAAGA AGGACTCCAG 
CTCCGCGTGT CCCAGATCGA TAGCGCCCGC ATGGTGCTCC ATATTCGGGC GGGAAAAGGC 
AACAAAGATC GTGATGTTCC CTTGCCCGCA TCCGCTCTCC AGGTGCTTCG CGTGCATTGG 
CGAACTCATC GGCATCCGAT CTGA
 
Protein sequence
MTTALRRRMT EDMQLRGLSR ATQQSYLYTI GLIARSFGRS PDQLTDTDLR HYFLYLRHEQ 
HRSRSTIIRT LCALKFLYEQ TLQRTLPSLE LIRAPKEHKL PVVLCPEDIR RILVQIKVDQ 
YRVCLAIIYA CGLRLQEGLQ LRVSQIDSAR MVLHIRAGKG NKDRDVPLPA SALQVLRVHW 
RTHRHPI