Gene Haur_1904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_1904 
Symbol 
ID5733793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand+ 
Start bp2298422 
End bp2299435 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content50% 
IMG OID641279048 
Productpeptide chain release factor 2 
Protein accessionYP_001544675 
Protein GI159898428 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID[TIGR00020] peptide chain release factor 2 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.430397 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCATGACT TAGAACATCA GGCTGCCGAA CCAAGCTTGT GGGATAATCC ACAACAGGCC 
CAAAGTATTT TGCAACGACT CGCTCGCATG CAAGAAGAAT TGAAAATGTG GGATAGTTTA 
GCCGTCGATT TGGCAACCCT GCGCGATCTG TTGCAACTTT CGGCTGATGA TGCTGATTCG 
CTCAGCCAAA TTGAGCGTGA GGTCAACGGC TTGACCAAAT CGGTCGATCA GCTTGAATTG 
AGCATTTTGC TGGGCGAAAA ATACGATAGC ACCAATGCTT TTATCTCGAT TCAATCGGGC 
GCTGGCGGAG TCGAATCACA GGATTGGGCG CAGATGTTGT TGCGTATGTA TAGCCGTTGG 
GGCGAAAGCC AGGGTTTTCG TACCACGATT GTCGATATGA TGGACGGCGA AGAGGCAGGC 
ATTAAAAGTG CTACCTTAGA ATTGCGCGGC CCCTATGCTT ATGGCTATGC CAAGGCCGAG 
GCTGGCATTC ATCGTTTAGT TCGGCTTTCG CCTTTCGATG CCAACCATCG TCGCCATACC 
TCGTTTGCCC GGGTTGAGGT GTTGCCCGAA GTCGATGATG CCGCCGAAGT CAAAATTAAT 
CCTGAAGATC TGCGGGTTGA TGTCTATCGG GCTGGTGGCC ATGGTGGGCA AGGTGTTAAT 
ACAACTGACT CAGCGGTGCG TTTGGTTTAT CGTGGTGGCA CGCCCGATGA AATTATCGTA 
ACCTGTCAAA ATGAACGTTC GCAATTGCAA AATAAAGAAA CCGCGATGAA TGTGTTGCGG 
GCGCGTTTGT TGGAACGTGA GCTAGCCCGC CAAGTTGCTG AACGTGCCAA ACTCAAGGGC 
GAACATCGCG ATGCCGCTTG GGGCAATCAA ATTCGTTCGT ATGTGCTTGA CGATCGGCGA 
GTTAAAGATC ATCGGACCAA CGTCGAAACA TCGAATACCC AAGCAGTGCT CGATGGCGAG 
ATTGATTTAT TTATCGATGC CTTCTTGCGC TGGAGAACCG AAGGCACAGA GTAG
 
Protein sequence
MHDLEHQAAE PSLWDNPQQA QSILQRLARM QEELKMWDSL AVDLATLRDL LQLSADDADS 
LSQIEREVNG LTKSVDQLEL SILLGEKYDS TNAFISIQSG AGGVESQDWA QMLLRMYSRW 
GESQGFRTTI VDMMDGEEAG IKSATLELRG PYAYGYAKAE AGIHRLVRLS PFDANHRRHT 
SFARVEVLPE VDDAAEVKIN PEDLRVDVYR AGGHGGQGVN TTDSAVRLVY RGGTPDEIIV 
TCQNERSQLQ NKETAMNVLR ARLLERELAR QVAERAKLKG EHRDAAWGNQ IRSYVLDDRR 
VKDHRTNVET SNTQAVLDGE IDLFIDAFLR WRTEGTE