Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_1694 |
Symbol | |
ID | 5733578 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 1968472 |
End bp | 1969548 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641278833 |
Product | permease |
Protein accession | YP_001544465 |
Protein GI | 159898218 |
COG category | [R] General function prediction only |
COG ID | [COG0701] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000186998 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGTTG TCAGTATCGA TGTTAAACCC AAAAACCAAC GCAAATGGCT ACTCTTTTTC GCGCCAATCA TCGGCATTCT TGGGCTGTGG CTGGCGAGCG GCTGGCTTGT CCCAAGCAAT TTAGCCCCCT TAACCAACAA ACTTCAAGGC TTAGTCACCA CCTTTCAAGG GATTTTTATT GAGGCGCTGC CCTTTCTTAG TGCAGGGGTG ATTGTTTCGG TATTAATTGG CGAGTTCGTC AAGCCGCAGC ATTTGGCCAG TTTTGTGCCC CAAAATGCCT TTGGAGCCTC AATTTTTGGC TCGCTTTTGG GCTTGCTGTT TCCGGTCTGC GAGTGTGGGG CGATTCCAAC CAGTCGGCGG TTGTTGCGCA AAGGCGCACC AGCCTCAATG GGAATTGCCT TTGCCTTAGC GGCCCCCGTG GTCAACCCAA TTGTGCTGAT CTCAACCTCG ATTGCCTTTG GCGATGTGCG TTGGGCTTTG GCGCGGGTCG GCTTTACAAT CATCATTGCC TTAACAATTG GCTTGATTAT TGGAGCTGGA ATTAAACGCG AAGCAATTTT GACCCCACTT GCCCTAACCC CCGATGTTGA ACATGATCAT AGCCATTGCG ACCATGATCA TGGTGCTTGC GACCATACCC ACGAACAACC CAAGGGTCGT TTGGCAGGCC TGATTGCCCA CGGCAGCGTT GAATTTTTTG AGATGGCCCA GTATTTGGTG ATGGGTTCGT TGTTGGCAGC GACTATGCAA ACCTTCATTC CCCAATCGGC CTTGCTCACT TTAAATGATA GCGGCATCGG CTTTTTTGCT CCGTTGTTGG GGATTGTGGT ATTGATGTTG GTGGCAGTGC TGCTTTCCGT GTGTTCCACG GTTGATGCTT TTTTGGCCTT ATCGTTCCTT GGCTTGTTTC ATCCAGGTGC AGTCATGGCC TTTTTGGTCT TTGGCCCGAT GATTGATATT AAAAGTACCT TGATGCTGAC CACGACATTC CGCCGCTCAG CAGTGATGGC AATGGTCGTG CTAGCAGCCT TATTTGCAAT TATTGCTGGC TTGATCAGCT ATGTTGTTTT GATCTGA
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Protein sequence | MAVVSIDVKP KNQRKWLLFF APIIGILGLW LASGWLVPSN LAPLTNKLQG LVTTFQGIFI EALPFLSAGV IVSVLIGEFV KPQHLASFVP QNAFGASIFG SLLGLLFPVC ECGAIPTSRR LLRKGAPASM GIAFALAAPV VNPIVLISTS IAFGDVRWAL ARVGFTIIIA LTIGLIIGAG IKREAILTPL ALTPDVEHDH SHCDHDHGAC DHTHEQPKGR LAGLIAHGSV EFFEMAQYLV MGSLLAATMQ TFIPQSALLT LNDSGIGFFA PLLGIVVLML VAVLLSVCST VDAFLALSFL GLFHPGAVMA FLVFGPMIDI KSTLMLTTTF RRSAVMAMVV LAALFAIIAG LISYVVLI
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