Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_1693 |
Symbol | trpA |
ID | 5733577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 1967519 |
End bp | 1968334 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641278832 |
Product | tryptophan synthase subunit alpha |
Protein accession | YP_001544464 |
Protein GI | 159898217 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0159] Tryptophan synthase alpha chain |
TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000483828 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCGAA TTGCCCAAAC TTTTGAACGC TTAGCCAGCC AAGGTCGGAC AGCCCTGATG CCATTTTTGA CGATTGGCTA CCCTGAGCGT GATTCTGCCC TGAGTTTAGC CCAAGCCTTG GTTGCTGGCG GCGCAGATAT GCTTGAGCTT GGCATGCCCT TTTCTGATCC GTTGGCCGAT GGCGCGACGA TTCAACGTAC CACCGATATT GCCCTAACCA ATGGAGTGGA TATTGGGTTT TGTTTGGAGA CGGTGCGCCA ATTACGAGCG ACTGGCATGA GCATTCCGTT ATTGCTGATG GGCTATTTCA ACCCTATGTT TCAATATGGC GTTGAACGGT TTGTGGCCGA AGCTAAAGCG GCGGGTGCTG ATGGTTTTAT CGTGCCTGAT TTACCACCTG AGGAGGCCGA CGAATTTCAT GCTGCGGCCA AAGCCCATGA GTTGGATTTG GTGTTCTTGT TGGCTCCAAC CTCGACTGAT GCCCGTATCG CCAAGATTGC CAGCCTGTCG TCGGGGTTTA TCTACTGTGT GGCATTGCGC GGCGTAACTG GTGCGCGGGC TGCGTTGGCA GACGATTTGG GTGATTTCTT GGCGCGAGTA CGCCAATATA GCCAATTGCC GCGTGCGGTT GGCTTTGGCA TCTCCAAACC TGAACATGTG GCCGCAGTTG CCAAAATGGC TGAAGGGGCA ATTTGCGCCA GTGCCTTGCT CGATTATATT GGCAATTTGC CCGCCGAAGA GCGTGCTACT GGAGCGCAAC AGTTTGTGCA AAGCTTGCGC GATGCTGCTG ATCGGGCTAC GGGCTATCAA CAATAA
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Protein sequence | MSRIAQTFER LASQGRTALM PFLTIGYPER DSALSLAQAL VAGGADMLEL GMPFSDPLAD GATIQRTTDI ALTNGVDIGF CLETVRQLRA TGMSIPLLLM GYFNPMFQYG VERFVAEAKA AGADGFIVPD LPPEEADEFH AAAKAHELDL VFLLAPTSTD ARIAKIASLS SGFIYCVALR GVTGARAALA DDLGDFLARV RQYSQLPRAV GFGISKPEHV AAVAKMAEGA ICASALLDYI GNLPAEERAT GAQQFVQSLR DAADRATGYQ Q
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