| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1601 |
|---|
| Symbol | |
|---|
| ID | 5733488 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 1856581 |
|---|
| End bp | 1858326 |
|---|
| Gene Length | 1746 bp |
|---|
| Protein Length | 581 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641278740 |
|---|
| Product | integral membrane sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_001544372 |
|---|
| Protein GI | 159898125 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4585] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAATA AACTCAAAAT CGACCGCGAA CAAACCCAAT GGCGCAGCAG CACAATTTTG
CGCTCGCTGC CAATTATGTT AATTCCAATT GCGGTGGCAA TTATTAGCCT GCTCTGGCTA
CGAATGAAGC TTCCCGCCGA GCAATTCAAT CAACAACCGC AACGTGATGG CACACCAATT
ACCGCAATTG TGGTGATCAT TATGTTTGTG TCGGCCTTAA TTATCTTTGT ACGTTTAGGC
CGACCAACCA TCTCAGCCTT TGCCTTAGTG GGCTTTTGGA CACTGATCAC CACCAGTTTG
GCAGTACGCA GCGGGATCAC CAGCTTTTTT CCGGCGCTGT TGGTCTTGCC AATTTGCGCC
GCAGGCTTGT TGATTGATCG GAGTGCCAGC ATTGGTTTAG CGGTCTTAGC CAGTTTGTTG
GTAATCAGCC TCGCTTGGGC CAAACTTCAG GGCTACGATT TAGCTCGCCA AGCGCCGCCC
TCAGTCTTCA CTCGCTATCC TTGGCTGGTT TCAACCGTAT TTTGGATTAC GCTCTTTTGG
ATGGTCGCAA GCATGACCTG GCTCTTAGCG GGGAATTTAC AACGAGCCTT GCAGCAAAGT
CGTGCTCATG CCCAAGATTT GGAGCAGTTG CGCAGCCAAT TGGAGCAGCG GGTGCAAGCC
CAAACTGCTG AGCTTGCTCA ACGCACCCAT CGCGCAGAAG CATTGTATAA CATCAGTAGT
GCCCTAGCCC TACCAGCAGA TATTACCCAA ATATTACCGT TGATTGCCGA GCAAGCCCAT
CAATTGCTGC ATGTCGATTA CTCGTGGATT ATGCTCAACC ATCAGTGTCT TGCGGCCTAT
CCCGAAGCGG CTGTTCACGA ACCACACTTG CAATTTGAGC CAACCCAAAA CACATCAGTT
ATGTCAATAT CCAGCAAATT TGGCGAGCAT ACCGCCTTGG TGCTGCCATT TCAACTTGAA
AACGACCAAG TGCAATTAAT TTTAGCTGGT GCAGCAATCG CCCAAACCAA TACCGATGAT
CGTGCCCTCG CCGAGGGTTT GCGCGATCAA GCAGTGTTGG CCTTGAACAA CCAACGTTTA
TTAGCCCAAG TGCGTGATAA AGCCATGCTC GAAGAACGCA CCCGGTTAGC CCGCGATATT
CACGATACTT TGGCTCAAGG CTTAACTGGT ATTGTGATTC AGCTTGGGGC AACTCAACGG
GCCTTAGTTT ATAGCCCCAG CGAGAGTAGC ACCCACTTGG CCTTAGCTAG CCGTATGGCC
CGCGAAGCCT TGGCCGAAGC TCGCGCCTCG GTTTGGAATT TACGTGCACC CTTGCTGGAT
GCCAATAGCT TGACCAAGGC CATTCAGGAA CTCGCGGCCC ATCCCATGCG CTCTGATTTA
CAGGTTGATG TGCAGATTCA TGGCCAAGTG CTAAGACTTG ATTTGCACGA CGAAACCGCC
CTGTTACGGA TCACTCAAGA AGCTTTGGCG AATGTGGTCA AACATTCCAA AGCTGAACAT
GTCAGCATTC AATTGATCTA TGGGAATAGC AGCGTGGAGC TATTAATTCA CGACAATGGC
ACAGGCTTCG ATCAGGCGAT TTTAACCAAC CAAATGCAGA TGACCAACCA TTTTGGCCTG
ATTGGCATCC GCGAACGGGT CGCCCAAATC GGTGGTAGCC TACAATTAAG CAATCAGCAT
GGCGCGTTGG TTCATGTGCA AATTCCCTAC AATCTGCCCC AAACAGCCTT GGTTGAAATG
GAGTAA
|
|---|
| Protein sequence | MSNKLKIDRE QTQWRSSTIL RSLPIMLIPI AVAIISLLWL RMKLPAEQFN QQPQRDGTPI
TAIVVIIMFV SALIIFVRLG RPTISAFALV GFWTLITTSL AVRSGITSFF PALLVLPICA
AGLLIDRSAS IGLAVLASLL VISLAWAKLQ GYDLARQAPP SVFTRYPWLV STVFWITLFW
MVASMTWLLA GNLQRALQQS RAHAQDLEQL RSQLEQRVQA QTAELAQRTH RAEALYNISS
ALALPADITQ ILPLIAEQAH QLLHVDYSWI MLNHQCLAAY PEAAVHEPHL QFEPTQNTSV
MSISSKFGEH TALVLPFQLE NDQVQLILAG AAIAQTNTDD RALAEGLRDQ AVLALNNQRL
LAQVRDKAML EERTRLARDI HDTLAQGLTG IVIQLGATQR ALVYSPSESS THLALASRMA
REALAEARAS VWNLRAPLLD ANSLTKAIQE LAAHPMRSDL QVDVQIHGQV LRLDLHDETA
LLRITQEALA NVVKHSKAEH VSIQLIYGNS SVELLIHDNG TGFDQAILTN QMQMTNHFGL
IGIRERVAQI GGSLQLSNQH GALVHVQIPY NLPQTALVEM E
|
|---|
| |