Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_1514 |
Symbol | |
ID | 5733399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 1764576 |
End bp | 1766438 |
Gene Length | 1863 bp |
Protein Length | 620 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641278652 |
Product | beta-lactamase |
Protein accession | YP_001544286 |
Protein GI | 159898039 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00027695 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCGATTC CCACTAATTG GCAACTTGAG GAACAAGCTG GTATTGTGCG GCTGAACGAT CCCGATCAAA AAATTACGAT TGCCCTGCTG AGTGTTGAAG AAGCCGATTT GGCCAAGGCG ATTGAATTAG GCTGGCAGCA AGCCGACCCA AGTTTTACGC TTACCCCCGA TGATAGCCAA GAAATGCCAG CGCCAAATGG TGTGGAAAAA GCCTTAGTTG CGGCATATGA CACCAAGAAC ACGGCTCAAA CGACGATTGC CTTGGCCCAA TTACATGAAG GCATGGCGTA TTTGATGCTG GTGCAAGGCG AAAATACCAC AATTGCCAAG CGTCAATCGC AAGTTGGCAT TATTCAATCG GGCTTTACGA TTTTGGCGCT CAATCAAACC ACGCTTAGCG CTGATCAACG GGTCGATGTT GGGCCAGAAC TGATCAGCGA ATTAGAAAGC TTTATCCAAG CCGAACAAGC CGAATATAAA ATTCCTGGCG TGAGTGTGGC GATTGTCCAA GATGGTCAAA TTGTCTATAG CAAGGGTTTT GGCGTGCGTG ATGTTGTTTC GCAAGCCCCC ATGGATGCTG ATACCCAGAT GATGATTGGC TCAACTGGCA AGAGCTTAAC GACCTTATTA ATGGCAACTT TGGTCGATCA AGGCAAGCTG GATTGGGATA CCCCGGTTGT CGAGTTATTG CCCAATTTCA AGGTCAAAGA TCCGGAAATT ACCAAGCAAA TCACGGTGCG CCATTTGGTT TGTGCCTGTA CTGGCGTGCC ACGCCGTGAT TATGAGATGA TTTTCAATGC TGAGGATTTG GATGCCCAAG GCATTATCGC TTCGGTTGCT GATTTTGAGT TCTTTACCGA TTTTGGCGAA GCTTTTCAAT ATAGCAATCA GATGGTGGCG ATTGGCGGCT TTGCGGCAGC GGCGGCCAGT GGCGGCGAGC TAACGCAGCT TGATCAAACC TTTGCTCAAG CATTAACCGA ACGGGTGCTC AAACCAATGG GTATGAACAG CACCACGCTT GATCAAGCAG CCGTTGAGGC CAGCCCTAAC CATGCGCTGC CCCATGGCTT GGATTTGGTC AACGCAACCT ACCAAACCTT GCCAATCAGC ATGGAATTTG CGATCAAAGG AGTAGCTCCA GCAGGCGCAA CCGAGTGGTC AACTGCCAAC GATATGGGCA ATTATCTGAT TACCCTGCTC AATCATGGCA TTACGCCTAG TGGTCAACGC TTAGTTTCCG ACGAAAATTT AGCTGTGTTG TGGGAGCCGC AAATTGCCAT CGATGCTAAA TCGAGCTATG GGCTTGGTTG GATGATCAGC GACTACCATG GCTTGGAATT TATTGCTCAC GGCGGTACGA CCTTTGGTTT CTCATCAGAG TTTGCCTTTA TTCCAGAGGC CAACATTGGG ATTGTGGTGT TGACTAATGG CCAATACGCC AACCATATTG CTACAAGTAT TAGCGACCGC TACTTTGAAT TAGCCTTTGA TCAGCCAAGC AAGGCTGCTG AAACCTCAGC CTACACTGCT CAAAGCATCG AACAATCGTT GGGCGAAATC GCCAAAAATA TCGTGCCTGA GCTGGATTTG GCGAGCGTTG AGCCATTGTT GGGCAGCTAT ACCAATGCCG CCTTGGGTGA TGTGAGTTTG CTACTCAGTG GCGAGGAATT GTGGCTGGAT ATTGGTGCAA TTCAGACCCA ATTCAAGCCA GTCTTGAACG AACAAGGCCA GCCAGATGGC TATCTCTCAG TAACGCCACC GTTTACTGGA ATTCCCTTCA AAACCGGAGT TGATGCCAAT AACCAACCAA CCTTGACCAT GGATCTTGGC AGCGAAACCT ATCTCTTTAC CCGTAAACCA TAA
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Protein sequence | MPIPTNWQLE EQAGIVRLND PDQKITIALL SVEEADLAKA IELGWQQADP SFTLTPDDSQ EMPAPNGVEK ALVAAYDTKN TAQTTIALAQ LHEGMAYLML VQGENTTIAK RQSQVGIIQS GFTILALNQT TLSADQRVDV GPELISELES FIQAEQAEYK IPGVSVAIVQ DGQIVYSKGF GVRDVVSQAP MDADTQMMIG STGKSLTTLL MATLVDQGKL DWDTPVVELL PNFKVKDPEI TKQITVRHLV CACTGVPRRD YEMIFNAEDL DAQGIIASVA DFEFFTDFGE AFQYSNQMVA IGGFAAAAAS GGELTQLDQT FAQALTERVL KPMGMNSTTL DQAAVEASPN HALPHGLDLV NATYQTLPIS MEFAIKGVAP AGATEWSTAN DMGNYLITLL NHGITPSGQR LVSDENLAVL WEPQIAIDAK SSYGLGWMIS DYHGLEFIAH GGTTFGFSSE FAFIPEANIG IVVLTNGQYA NHIATSISDR YFELAFDQPS KAAETSAYTA QSIEQSLGEI AKNIVPELDL ASVEPLLGSY TNAALGDVSL LLSGEELWLD IGAIQTQFKP VLNEQGQPDG YLSVTPPFTG IPFKTGVDAN NQPTLTMDLG SETYLFTRKP
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