| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1265 |
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| Symbol | |
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| ID | 5733158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 1473745 |
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| End bp | 1475718 |
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| Gene Length | 1974 bp |
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| Protein Length | 657 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641278405 |
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| Product | glycogen debranching enzyme, putative |
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| Protein accession | YP_001544041 |
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| Protein GI | 159897794 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3408] Glycogen debranching enzyme |
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| TIGRFAM ID | [TIGR01561] glycogen debranching enzyme, archaeal type, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGGAC GTGAAATTCT TGGGCATCCC GCTGCTGCAT TACGCCGCGA ATGGATTGTA
ACCAATGGGG CTGGGGCATA TGCAATGGGT TCGCTCTTGG CCAATGCTCC AATTCGCAAA
TATCATGGCT TGTTGATTGC TGCCTTAGAG CCGCCGCTTG GTCGTACCTT GTTGGTTGGT
GGCTTGCAAG CCAGCGCTGA ATATGGCTCA GAAACCTATG AGCTGAGTAG CTTTGAATAT
AGCGATGGCC GTTTAAGTGC GGGCCATTGC AACCTTGAAA CATGGCAATT GGATGGCGCG
ATTCCAACTG CGCGGTATGC CTTGGCCGAG GCAGTGCTCA GCCAACGGAT TTGGATGGAA
GATGGAGCTA ATACCACCTA TCTGCTGCTG ACTCATGAGC GTGGCAACGA CCCGATTAAG
CTTGAATTAC GCCCCTTATT GAGCGAGCGC GATCATCACG ATACAACCGT TGAAACCGAT
TGGCAGCCCA ATTTTGCCGC CTTGACCAAT GGCGTATTGA TGACCACGCC TGCTGGTACG
CAGTTGCGTA TGCTCAGCGA CCACGCGACA TGGCAAACCG AGTCAGCAAC ATGGGTTGAA
GATATTTATT ATCGTGAAGA ATTAGAGCGT GGCTACCCTG ATACCGCACG ATTGTTACAA
GCAGGCCGAT TTAGCGCAAG CTTACAGCCT GGTCAAAGCC TGACCTTGGT ATTTTCAACT
GAAACTGAAC CAAGCACTGA TGGCTTAGCA GCGCTGGCGC GTGAACAAGC ACGCCAAGCC
CAATTGCTCG AGCAGGCTCG GCTTTTGCAC AAAGCTCCCG ATTTTATCAA GCAACTGGTG
TATGCCGCCG ATCAATTTAT GGTGCGGCGG GCGGTACAAT TGCCCGATGG CAGCACATGG
CAAGGCTGGA GCGTGATTGC TGGCTATCCA TGGTTTAGCG ATTGGGGCCG CGACACCATG
ATTTCCTTGC CTGGTTTGTT GATGGCAACT GGGCGGGCTA CGTTGGCGGC TGATGTGTTG
CGCACATGGA GCCATTTTTT AAGCCAAGGC ATGTTGCCCA ACCGCTTCCC TGATGTTGGC
GCTGAGCCAG AATACAACAC TGTCGATGCG ACCCTATGGT TTTTTCAAGC GCTGCGCACG
GTTTATCAAG CAACTGGCGA TATTCAATTG GTTGCCGATT TATACCCAAA ATTGGTCGAA
ATTATTGATT GGCATGAACG TGGTACCCGC TACTCAATCA AAGTTGCCGA TGATTATCTC
TTGACTGCTG GCGAACCCCA TATTCAATTA ACCTGGATGG ATGCCAAGTT TGAGGATTGG
GTGGTCACAC CCCGCGAGGG CAAAGCGGTT GAAATTAATG CCTTGTGGTA TAGTGCCCTA
CGAACTTTGG GCGAATTTGC CACTTTATTG GGCAATGATC AGGATGTTGA GCGCTTTCGC
TGTGCTGCTG AACGAGTGGC GACTGCTTAT CGCCGCTTTT GGTCGGCTGA GCATGGCTAC
CTCTACGACG TAATCGACGG CCCGCACGGC GATGATCCGG TGTTGCGACC CAACCAACTA
TTTGCAGTTT CGGTGGCACA CTCGCCGCTT GATGATGCCA CCGCCAAAGC TGTGGTTGAT
AGCTGCGCCC GCCATCTCTT AACCTCATAT GGTTTGCGCT CGTTAGCCCC CCACGACCCA
CAATACCTTG GTCGCTATGG TGGCGATTTG AAAACCCGCG ATGCCTCGTA TCATCAAGGC
ATCACGTGGG GCTGGTTGAT TGGGCCATTT ATCAGTGCGA TCAGCAAAGT CTATGGGGTT
GAGCAGGCGC GTAGTTATCT GCAACCATTC GCCGATCACC TGCGCGATGC TGGAATTGGC
TCGGTGAGCG AAATTTTCGA TGGCGATGCG CCGATCACCC CGCGCGGCTG CCCATGGCAA
GCTTGGAGCG TGGCAGAATT ACTGCGTTGT AGCGTCGAAC TGAATAATCG CTAA
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| Protein sequence | MFGREILGHP AAALRREWIV TNGAGAYAMG SLLANAPIRK YHGLLIAALE PPLGRTLLVG
GLQASAEYGS ETYELSSFEY SDGRLSAGHC NLETWQLDGA IPTARYALAE AVLSQRIWME
DGANTTYLLL THERGNDPIK LELRPLLSER DHHDTTVETD WQPNFAALTN GVLMTTPAGT
QLRMLSDHAT WQTESATWVE DIYYREELER GYPDTARLLQ AGRFSASLQP GQSLTLVFST
ETEPSTDGLA ALAREQARQA QLLEQARLLH KAPDFIKQLV YAADQFMVRR AVQLPDGSTW
QGWSVIAGYP WFSDWGRDTM ISLPGLLMAT GRATLAADVL RTWSHFLSQG MLPNRFPDVG
AEPEYNTVDA TLWFFQALRT VYQATGDIQL VADLYPKLVE IIDWHERGTR YSIKVADDYL
LTAGEPHIQL TWMDAKFEDW VVTPREGKAV EINALWYSAL RTLGEFATLL GNDQDVERFR
CAAERVATAY RRFWSAEHGY LYDVIDGPHG DDPVLRPNQL FAVSVAHSPL DDATAKAVVD
SCARHLLTSY GLRSLAPHDP QYLGRYGGDL KTRDASYHQG ITWGWLIGPF ISAISKVYGV
EQARSYLQPF ADHLRDAGIG SVSEIFDGDA PITPRGCPWQ AWSVAELLRC SVELNNR
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